Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 C1orf229-201ENST00000623686 2258 ntBASIC23.91■■□□□ 1.42
FOXR1Q6PIV2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.9■■□□□ 1.42
FOXR1Q6PIV2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FOXR1Q6PIV2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FOXR1Q6PIV2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.9■■□□□ 1.42
FOXR1Q6PIV2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FOXR1Q6PIV2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FOXR1Q6PIV2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
FOXR1Q6PIV2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
FOXR1Q6PIV2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.89■■□□□ 1.42
FOXR1Q6PIV2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
FOXR1Q6PIV2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
FOXR1Q6PIV2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.89■■□□□ 1.41
FOXR1Q6PIV2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.89■■□□□ 1.41
FOXR1Q6PIV2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
FOXR1Q6PIV2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.89■■□□□ 1.41
FOXR1Q6PIV2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
FOXR1Q6PIV2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
FOXR1Q6PIV2 AP003733.4-201ENST00000623785 1697 ntBASIC23.89■■□□□ 1.41
FOXR1Q6PIV2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
FOXR1Q6PIV2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.88■■□□□ 1.41
FOXR1Q6PIV2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
FOXR1Q6PIV2 AC026202.3-201ENST00000600805 1127 ntBASIC23.88■■□□□ 1.41
FOXR1Q6PIV2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.88■■□□□ 1.41
FOXR1Q6PIV2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.88■■□□□ 1.41
FOXR1Q6PIV2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
FOXR1Q6PIV2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 AC007375.3-201ENST00000600936 2314 ntBASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXR1Q6PIV2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FOXR1Q6PIV2 KRT8P33-201ENST00000508125 1423 ntBASIC23.86■■□□□ 1.41
FOXR1Q6PIV2 AC004812.2-201ENST00000611079 2094 ntBASIC23.86■■□□□ 1.41
FOXR1Q6PIV2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXR1Q6PIV2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXR1Q6PIV2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXR1Q6PIV2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FOXR1Q6PIV2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FOXR1Q6PIV2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
FOXR1Q6PIV2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FOXR1Q6PIV2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FOXR1Q6PIV2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 DUX4L9-201ENST00000449051 1259 ntBASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 AL035685.1-201ENST00000636663 812 ntBASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FOXR1Q6PIV2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
FOXR1Q6PIV2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.83■■□□□ 1.41
FOXR1Q6PIV2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
FOXR1Q6PIV2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FOXR1Q6PIV2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
FOXR1Q6PIV2 RP9P-202ENST00000450133 1212 ntBASIC23.83■■□□□ 1.41
FOXR1Q6PIV2 AC093536.1-201ENST00000569153 554 ntBASIC23.83■■□□□ 1.41
FOXR1Q6PIV2 AL451085.2-201ENST00000605085 799 ntBASIC23.83■■□□□ 1.41
FOXR1Q6PIV2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.83■■□□□ 1.4
FOXR1Q6PIV2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXR1Q6PIV2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FOXR1Q6PIV2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXR1Q6PIV2 AC010980.1-201ENST00000587192 1142 ntBASIC23.82■■□□□ 1.4
FOXR1Q6PIV2 AC233723.2-201ENST00000623798 2106 ntBASIC23.82■■□□□ 1.4
FOXR1Q6PIV2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
FOXR1Q6PIV2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.82■■□□□ 1.4
FOXR1Q6PIV2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
FOXR1Q6PIV2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.81■■□□□ 1.4
FOXR1Q6PIV2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXR1Q6PIV2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FOXR1Q6PIV2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms