Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 YEL028WYEL028W 462 nt5.42□□□□□ -1.54
HRD3Q05787 YIL060WYIL060W 435 nt5.42□□□□□ -1.54
HRD3Q05787 RHO2YNL090W 579 nt5.42□□□□□ -1.54
HRD3Q05787 YPR098CYPR098C 486 nt5.42□□□□□ -1.54
HRD3Q05787 AME1YBR211C 975 nt5.42□□□□□ -1.54
HRD3Q05787 ARO9YHR137W 1542 nt5.42□□□□□ -1.54
HRD3Q05787 YLR402WYLR402W 192 nt5.41□□□□□ -1.54
HRD3Q05787 MFA2YNL145W 117 nt5.41□□□□□ -1.54
HRD3Q05787 SCP1YOR367W 603 nt5.41□□□□□ -1.54
HRD3Q05787 YPL168WYPL168W 1293 nt5.41□□□□□ -1.54
HRD3Q05787 TFB4YPR056W 1017 nt5.41□□□□□ -1.54
HRD3Q05787 YAP1YML007W 1953 nt5.41□□□□□ -1.54
HRD3Q05787 AMA1YGR225W 1782 nt5.41□□□□□ -1.54
HRD3Q05787 SKN1YGR143W 2316 nt5.4□□□□□ -1.54
HRD3Q05787 YDR134CYDR134C 411 nt5.4□□□□□ -1.54
HRD3Q05787 ATP12YJL180C 978 nt5.4□□□□□ -1.54
HRD3Q05787 MHO1YJR008W 1017 nt5.4□□□□□ -1.54
HRD3Q05787 MTF1YMR228W 1026 nt5.4□□□□□ -1.54
HRD3Q05787 PGA2YNL149C 390 nt5.4□□□□□ -1.54
HRD3Q05787 RPS19BYNL302C 435 nt5.4□□□□□ -1.54
HRD3Q05787 GPM3YOL056W 912 nt5.4□□□□□ -1.54
HRD3Q05787 SER1YOR184W 1188 nt5.4□□□□□ -1.54
HRD3Q05787 BZZ1YHR114W 1902 nt5.4□□□□□ -1.55
HRD3Q05787 UPS3YDR185C 540 nt5.39□□□□□ -1.55
HRD3Q05787 MND2YIR025W 1107 nt5.39□□□□□ -1.55
HRD3Q05787 UBC12YLR306W 567 nt5.39□□□□□ -1.55
HRD3Q05787 NCE103YNL036W 666 nt5.39□□□□□ -1.55
HRD3Q05787 UBA3YPR066W 900 nt5.39□□□□□ -1.55
HRD3Q05787 HXT3YDR345C 1704 nt5.39□□□□□ -1.55
HRD3Q05787 COQ6YGR255C 1440 nt5.39□□□□□ -1.55
HRD3Q05787 HFI1YPL254W 1467 nt5.39□□□□□ -1.55
HRD3Q05787 LSG1YGL099W 1923 nt5.38□□□□□ -1.55
HRD3Q05787 PDH1YPR002W 1551 nt5.38□□□□□ -1.55
HRD3Q05787 YEL020CYEL020C 1683 nt5.38□□□□□ -1.55
HRD3Q05787 MIF2YKL089W 1650 nt5.38□□□□□ -1.55
HRD3Q05787 YDL241WYDL241W 372 nt5.38□□□□□ -1.55
HRD3Q05787 YPT32YGL210W 669 nt5.38□□□□□ -1.55
HRD3Q05787 CTR3YLR411W 726 nt5.38□□□□□ -1.55
HRD3Q05787 VHS1YDR247W 1386 nt5.38□□□□□ -1.55
HRD3Q05787 CDC43YGL155W 1131 nt5.37□□□□□ -1.55
HRD3Q05787 YIL086CYIL086C 309 nt5.37□□□□□ -1.55
HRD3Q05787 PFA4YOL003C 1137 nt5.37□□□□□ -1.55
HRD3Q05787 HRT1YOL133W 366 nt5.37□□□□□ -1.55
HRD3Q05787 BNA5YLR231C 1362 nt5.37□□□□□ -1.55
HRD3Q05787 QDR1YIL120W 1692 nt5.37□□□□□ -1.55
HRD3Q05787 SAC6YDR129C 1929 nt5.36□□□□□ -1.55
HRD3Q05787 TEL2YGR099W 2067 nt5.36□□□□□ -1.55
HRD3Q05787 DIN7YDR263C 1293 nt5.36□□□□□ -1.55
HRD3Q05787 SKI8YGL213C 1194 nt5.36□□□□□ -1.55
HRD3Q05787 tR(ACG)JtR(ACG)J 73 nt5.36□□□□□ -1.55
HRD3Q05787 YIL077CYIL077C 963 nt5.36□□□□□ -1.55
HRD3Q05787 YAL016C-BYAL016C-B 186 nt5.36□□□□□ -1.55
HRD3Q05787 YAL056C-AYAL056C-A 351 nt5.36□□□□□ -1.55
HRD3Q05787 YPR109WYPR109W 885 nt5.36□□□□□ -1.55
HRD3Q05787 SRV2YNL138W 1581 nt5.36□□□□□ -1.55
HRD3Q05787 GAL10YBR019C 2100 nt5.35□□□□□ -1.55
HRD3Q05787 TKL1YPR074C 2043 nt5.35□□□□□ -1.55
HRD3Q05787 SRP101YDR292C 1866 nt5.35□□□□□ -1.55
HRD3Q05787 ALD6YPL061W 1503 nt5.35□□□□□ -1.55
HRD3Q05787 DUG1YFR044C 1446 nt5.35□□□□□ -1.55
HRD3Q05787 CLB5YPR120C 1308 nt5.35□□□□□ -1.55
HRD3Q05787 HEM3YDL205C 984 nt5.35□□□□□ -1.55
HRD3Q05787 YHR022CYHR022C 771 nt5.35□□□□□ -1.55
HRD3Q05787 UBS1YBR165W 834 nt5.35□□□□□ -1.55
HRD3Q05787 SEC18YBR080C 2277 nt5.35□□□□□ -1.55
HRD3Q05787 SMF3YLR034C 1422 nt5.34□□□□□ -1.55
HRD3Q05787 GLO2YDR272W 825 nt5.34□□□□□ -1.55
HRD3Q05787 YDR509WYDR509W 348 nt5.34□□□□□ -1.55
HRD3Q05787 YKL169CYKL169C 384 nt5.34□□□□□ -1.55
HRD3Q05787 BUD28YLR062C 378 nt5.34□□□□□ -1.55
HRD3Q05787 YMR075C-AYMR075C-A 366 nt5.34□□□□□ -1.55
HRD3Q05787 HOR7YMR251W-A 180 nt5.34□□□□□ -1.55
HRD3Q05787 DCC1YCL016C 1143 nt5.34□□□□□ -1.55
HRD3Q05787 ATG20YDL113C 1923 nt5.33□□□□□ -1.56
HRD3Q05787 SUB2YDL084W 1341 nt5.33□□□□□ -1.56
HRD3Q05787 RRP45YDR280W 918 nt5.33□□□□□ -1.56
HRD3Q05787 YGL101WYGL101W 648 nt5.33□□□□□ -1.56
HRD3Q05787 ARC19YKL013C 516 nt5.33□□□□□ -1.56
HRD3Q05787 OSW5YMR148W 447 nt5.33□□□□□ -1.56
HRD3Q05787 YNL019CYNL019C 855 nt5.33□□□□□ -1.56
HRD3Q05787 YNL033WYNL033W 855 nt5.33□□□□□ -1.56
HRD3Q05787 RPC19YNL113W 429 nt5.33□□□□□ -1.56
HRD3Q05787 LEM3YNL323W 1245 nt5.33□□□□□ -1.56
HRD3Q05787 VAM3YOR106W 852 nt5.33□□□□□ -1.56
HRD3Q05787 RDL2YOR286W 450 nt5.33□□□□□ -1.56
HRD3Q05787 ISA2YPR067W 558 nt5.33□□□□□ -1.56
HRD3Q05787 PEX34YCL056C 435 nt5.33□□□□□ -1.56
HRD3Q05787 TBF1YPL128C 1689 nt5.33□□□□□ -1.56
HRD3Q05787 APJ1YNL077W 1587 nt5.33□□□□□ -1.56
HRD3Q05787 CHL4YDR254W 1377 nt5.32□□□□□ -1.56
HRD3Q05787 KIP2YPL155C 2121 nt5.32□□□□□ -1.56
HRD3Q05787 AVT3YKL146W 2079 nt5.32□□□□□ -1.56
HRD3Q05787 NCS6YGL211W 1080 nt5.32□□□□□ -1.56
HRD3Q05787 HSP150YJL159W 1242 nt5.32□□□□□ -1.56
HRD3Q05787 PSR1YLL010C 1284 nt5.32□□□□□ -1.56
HRD3Q05787 YBL029WYBL029W 1131 nt5.32□□□□□ -1.56
HRD3Q05787 FAT3YKL187C 2253 nt5.32□□□□□ -1.56
HRD3Q05787 EIS1YMR031C 2532 nt5.32□□□□□ -1.56
HRD3Q05787 RET1YOR207C 3450 nt5.31□□□□□ -1.56
HRD3Q05787 STE13YOR219C 2796 nt5.31□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms