Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC005703.6-201ENST00000623265 1329 ntBASIC22.08■■□□□ 1.13
GABREP78334 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
GABREP78334 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
GABREP78334 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
GABREP78334 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.07■■□□□ 1.12
GABREP78334 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
GABREP78334 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
GABREP78334 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GABREP78334 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GABREP78334 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GABREP78334 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.07■■□□□ 1.12
GABREP78334 MIR4767-201ENST00000582827 78 ntBASIC22.07■■□□□ 1.12
GABREP78334 AC092171.4-201ENST00000609130 632 ntBASIC22.07■■□□□ 1.12
GABREP78334 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
GABREP78334 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
GABREP78334 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
GABREP78334 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GABREP78334 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GABREP78334 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GABREP78334 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
GABREP78334 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GABREP78334 AC097381.1-201ENST00000429019 1296 ntBASIC22.06■■□□□ 1.12
GABREP78334 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.06■■□□□ 1.12
GABREP78334 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.06■■□□□ 1.12
GABREP78334 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GABREP78334 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
GABREP78334 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
GABREP78334 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.05■■□□□ 1.12
GABREP78334 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
GABREP78334 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
GABREP78334 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.05■■□□□ 1.12
GABREP78334 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.04■■□□□ 1.12
GABREP78334 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
GABREP78334 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
GABREP78334 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.04■■□□□ 1.12
GABREP78334 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
GABREP78334 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
GABREP78334 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.04■■□□□ 1.12
GABREP78334 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
GABREP78334 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
GABREP78334 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
GABREP78334 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
GABREP78334 AC097639.1-201ENST00000565519 1891 ntBASIC22.03■■□□□ 1.12
GABREP78334 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
GABREP78334 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.03■■□□□ 1.12
GABREP78334 AC087623.3-201ENST00000607047 1098 ntBASIC22.03■■□□□ 1.12
GABREP78334 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.03■■□□□ 1.12
GABREP78334 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
GABREP78334 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.02■■□□□ 1.12
GABREP78334 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
GABREP78334 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.02■■□□□ 1.12
GABREP78334 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.02■■□□□ 1.12
GABREP78334 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.02■■□□□ 1.12
GABREP78334 CA15P2-201ENST00000611168 834 ntBASIC22.02■■□□□ 1.12
GABREP78334 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
GABREP78334 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
GABREP78334 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
GABREP78334 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
GABREP78334 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GABREP78334 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GABREP78334 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GABREP78334 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GABREP78334 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GABREP78334 AL162430.1-201ENST00000480705 870 ntBASIC22.01■■□□□ 1.11
GABREP78334 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.01■■□□□ 1.11
GABREP78334 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
GABREP78334 RASA4CP-201ENST00000424092 1398 ntBASIC22■■□□□ 1.11
GABREP78334 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22■■□□□ 1.11
GABREP78334 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22■■□□□ 1.11
GABREP78334 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22■■□□□ 1.11
GABREP78334 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22■■□□□ 1.11
GABREP78334 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
GABREP78334 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
GABREP78334 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GABREP78334 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GABREP78334 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GABREP78334 SERBP1P1-201ENST00000396021 1160 ntBASIC21.99■■□□□ 1.11
GABREP78334 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
GABREP78334 AC027682.1-201ENST00000562846 899 ntBASIC21.99■■□□□ 1.11
GABREP78334 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
GABREP78334 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GABREP78334 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
GABREP78334 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.98■■□□□ 1.11
GABREP78334 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
GABREP78334 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
GABREP78334 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GABREP78334 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GABREP78334 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.97■■□□□ 1.11
GABREP78334 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GABREP78334 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GABREP78334 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.97■■□□□ 1.11
GABREP78334 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.97■■□□□ 1.11
GABREP78334 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
GABREP78334 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
GABREP78334 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GABREP78334 AC096887.2-201ENST00000623443 1957 ntBASIC21.96■■□□□ 1.11
GABREP78334 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
GABREP78334 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.96■■□□□ 1.11
GABREP78334 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
GABREP78334 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms