Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPS27AP62979 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS27AP62979 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RPS27AP62979 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPS27AP62979 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.79■□□□□ 0.76
RPS27AP62979 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS27AP62979 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
RPS27AP62979 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.79■□□□□ 0.76
RPS27AP62979 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPS27AP62979 RAP2CP1-202ENST00000605179 643 ntBASIC19.79■□□□□ 0.76
RPS27AP62979 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS27AP62979 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS27AP62979 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RPS27AP62979 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS27AP62979 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPS27AP62979 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS27AP62979 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS27AP62979 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
RPS27AP62979 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.78■□□□□ 0.76
RPS27AP62979 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS27AP62979 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS27AP62979 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS27AP62979 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.77■□□□□ 0.76
RPS27AP62979 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS27AP62979 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPS27AP62979 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.77■□□□□ 0.76
RPS27AP62979 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS27AP62979 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS27AP62979 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS27AP62979 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS27AP62979 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
RPS27AP62979 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPS27AP62979 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS27AP62979 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS27AP62979 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS27AP62979 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS27AP62979 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RPS27AP62979 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS27AP62979 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS27AP62979 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS27AP62979 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS27AP62979 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RPS27AP62979 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RPS27AP62979 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 AC026202.3-201ENST00000600805 1127 ntBASIC19.75■□□□□ 0.75
RPS27AP62979 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.75■□□□□ 0.75
RPS27AP62979 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.75■□□□□ 0.75
RPS27AP62979 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS27AP62979 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS27AP62979 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS27AP62979 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS27AP62979 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS27AP62979 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RPS27AP62979 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
RPS27AP62979 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPS27AP62979 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS27AP62979 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.74■□□□□ 0.75
RPS27AP62979 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS27AP62979 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS27AP62979 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.73■□□□□ 0.75
RPS27AP62979 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS27AP62979 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.73■□□□□ 0.75
RPS27AP62979 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPS27AP62979 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.73■□□□□ 0.75
RPS27AP62979 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS27AP62979 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.73■□□□□ 0.75
RPS27AP62979 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS27AP62979 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.72■□□□□ 0.75
RPS27AP62979 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.72■□□□□ 0.75
RPS27AP62979 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.72■□□□□ 0.75
RPS27AP62979 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS27AP62979 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.72■□□□□ 0.75
RPS27AP62979 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS27AP62979 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS27AP62979 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RPS27AP62979 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RPS27AP62979 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS27AP62979 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
RPS27AP62979 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.71■□□□□ 0.75
RPS27AP62979 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RPS27AP62979 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS27AP62979 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPS27AP62979 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS27AP62979 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.71■□□□□ 0.75
RPS27AP62979 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPS27AP62979 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.7■□□□□ 0.74
RPS27AP62979 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS27AP62979 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS27AP62979 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms