Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEC61A1P61619 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SEC61A1P61619 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.02■□□□□ 0.79
SEC61A1P61619 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEC61A1P61619 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC61A1P61619 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC61A1P61619 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC61A1P61619 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC61A1P61619 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC61A1P61619 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.01■□□□□ 0.79
SEC61A1P61619 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC61A1P61619 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.01■□□□□ 0.79
SEC61A1P61619 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC61A1P61619 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SEC61A1P61619 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20■□□□□ 0.79
SEC61A1P61619 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEC61A1P61619 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEC61A1P61619 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SEC61A1P61619 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEC61A1P61619 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.99■□□□□ 0.79
SEC61A1P61619 RPS2P7-201ENST00000447334 885 ntBASIC19.99■□□□□ 0.79
SEC61A1P61619 AC087393.1-201ENST00000582896 145 ntBASIC19.99■□□□□ 0.79
SEC61A1P61619 AC074183.2-201ENST00000623112 922 ntBASIC19.99■□□□□ 0.79
SEC61A1P61619 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.99■□□□□ 0.79
SEC61A1P61619 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEC61A1P61619 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SEC61A1P61619 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.99■□□□□ 0.79
SEC61A1P61619 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SEC61A1P61619 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SEC61A1P61619 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEC61A1P61619 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SEC61A1P61619 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SEC61A1P61619 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SEC61A1P61619 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEC61A1P61619 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SEC61A1P61619 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SEC61A1P61619 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.98■□□□□ 0.79
SEC61A1P61619 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEC61A1P61619 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEC61A1P61619 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.97■□□□□ 0.79
SEC61A1P61619 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEC61A1P61619 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SEC61A1P61619 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEC61A1P61619 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEC61A1P61619 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEC61A1P61619 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEC61A1P61619 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SEC61A1P61619 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.97■□□□□ 0.79
SEC61A1P61619 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.97■□□□□ 0.79
SEC61A1P61619 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
SEC61A1P61619 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SEC61A1P61619 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SEC61A1P61619 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.97■□□□□ 0.79
SEC61A1P61619 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.97■□□□□ 0.79
SEC61A1P61619 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEC61A1P61619 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEC61A1P61619 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEC61A1P61619 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEC61A1P61619 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEC61A1P61619 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.96■□□□□ 0.79
SEC61A1P61619 AC103834.1-201ENST00000520383 144 ntBASIC19.96■□□□□ 0.79
SEC61A1P61619 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEC61A1P61619 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEC61A1P61619 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEC61A1P61619 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEC61A1P61619 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEC61A1P61619 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEC61A1P61619 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.95■□□□□ 0.78
SEC61A1P61619 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SEC61A1P61619 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.95■□□□□ 0.78
SEC61A1P61619 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEC61A1P61619 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.94■□□□□ 0.78
SEC61A1P61619 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.94■□□□□ 0.78
SEC61A1P61619 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.94■□□□□ 0.78
SEC61A1P61619 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.94■□□□□ 0.78
SEC61A1P61619 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.94■□□□□ 0.78
SEC61A1P61619 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SEC61A1P61619 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.94■□□□□ 0.78
SEC61A1P61619 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEC61A1P61619 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SEC61A1P61619 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.93■□□□□ 0.78
SEC61A1P61619 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SEC61A1P61619 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.93■□□□□ 0.78
SEC61A1P61619 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEC61A1P61619 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEC61A1P61619 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEC61A1P61619 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.93■□□□□ 0.78
SEC61A1P61619 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEC61A1P61619 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.93■□□□□ 0.78
SEC61A1P61619 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms