Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS1BP61024 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CKS1BP61024 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS1BP61024 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC15.96■□□□□ 0.15
CKS1BP61024 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS1BP61024 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS1BP61024 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS1BP61024 HGH1-207ENST00000628266 258 ntTSL 5 BASIC15.96■□□□□ 0.15
CKS1BP61024 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS1BP61024 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CKS1BP61024 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CKS1BP61024 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC15.95■□□□□ 0.14
CKS1BP61024 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CKS1BP61024 AL139125.2-201ENST00000623134 1869 ntBASIC15.95■□□□□ 0.14
CKS1BP61024 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CKS1BP61024 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.95■□□□□ 0.14
CKS1BP61024 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CKS1BP61024 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS1BP61024 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CKS1BP61024 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CKS1BP61024 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.95■□□□□ 0.14
CKS1BP61024 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS1BP61024 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS1BP61024 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.95■□□□□ 0.14
CKS1BP61024 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CKS1BP61024 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.95■□□□□ 0.14
CKS1BP61024 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS1BP61024 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS1BP61024 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.94■□□□□ 0.14
CKS1BP61024 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS1BP61024 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CKS1BP61024 AL359504.2-201ENST00000605506 1601 ntBASIC15.94■□□□□ 0.14
CKS1BP61024 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CKS1BP61024 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS1BP61024 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS1BP61024 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC15.94■□□□□ 0.14
CKS1BP61024 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC15.94■□□□□ 0.14
CKS1BP61024 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CKS1BP61024 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CKS1BP61024 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CKS1BP61024 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS1BP61024 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CKS1BP61024 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CKS1BP61024 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS1BP61024 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS1BP61024 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.93■□□□□ 0.14
CKS1BP61024 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS1BP61024 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CKS1BP61024 AC126177.7-201ENST00000547904 679 ntBASIC15.93■□□□□ 0.14
CKS1BP61024 CHST11-203ENST00000547956 936 ntTSL 2 BASIC15.93■□□□□ 0.14
CKS1BP61024 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
CKS1BP61024 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS1BP61024 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.93■□□□□ 0.14
CKS1BP61024 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS1BP61024 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS1BP61024 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC15.93■□□□□ 0.14
CKS1BP61024 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS1BP61024 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CKS1BP61024 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS1BP61024 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CKS1BP61024 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS1BP61024 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC15.92■□□□□ 0.14
CKS1BP61024 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS1BP61024 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.92■□□□□ 0.14
CKS1BP61024 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CKS1BP61024 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS1BP61024 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS1BP61024 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC15.92■□□□□ 0.14
CKS1BP61024 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CKS1BP61024 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS1BP61024 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CKS1BP61024 AP003733.4-201ENST00000623785 1697 ntBASIC15.91■□□□□ 0.14
CKS1BP61024 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CKS1BP61024 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CKS1BP61024 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC15.9■□□□□ 0.14
CKS1BP61024 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 DUX4L11-201ENST00000611504 1267 ntBASIC15.9■□□□□ 0.14
CKS1BP61024 DUX4L12-201ENST00000614593 1267 ntBASIC15.9■□□□□ 0.14
CKS1BP61024 DUX4L14-201ENST00000621227 1267 ntBASIC15.9■□□□□ 0.14
CKS1BP61024 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms