Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.35■□□□□ 0.85
FOXG1P55316 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXG1P55316 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXG1P55316 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXG1P55316 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
FOXG1P55316 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXG1P55316 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FOXG1P55316 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXG1P55316 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXG1P55316 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXG1P55316 AC131274.2-201ENST00000580697 1507 ntBASIC20.34■□□□□ 0.85
FOXG1P55316 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXG1P55316 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXG1P55316 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
FOXG1P55316 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXG1P55316 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.34■□□□□ 0.85
FOXG1P55316 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
FOXG1P55316 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXG1P55316 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXG1P55316 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FOXG1P55316 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
FOXG1P55316 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
FOXG1P55316 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXG1P55316 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXG1P55316 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXG1P55316 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
FOXG1P55316 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXG1P55316 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXG1P55316 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXG1P55316 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXG1P55316 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.32■□□□□ 0.84
FOXG1P55316 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXG1P55316 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXG1P55316 AL356441.2-201ENST00000443009 864 ntBASIC20.32■□□□□ 0.84
FOXG1P55316 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXG1P55316 SNX5-217ENST00000606557 1087 ntBASIC20.32■□□□□ 0.84
FOXG1P55316 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXG1P55316 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXG1P55316 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
FOXG1P55316 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
FOXG1P55316 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXG1P55316 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
FOXG1P55316 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXG1P55316 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
FOXG1P55316 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXG1P55316 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.31■□□□□ 0.84
FOXG1P55316 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXG1P55316 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXG1P55316 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXG1P55316 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
FOXG1P55316 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXG1P55316 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXG1P55316 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.3■□□□□ 0.84
FOXG1P55316 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXG1P55316 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.3■□□□□ 0.84
FOXG1P55316 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXG1P55316 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXG1P55316 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
FOXG1P55316 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXG1P55316 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXG1P55316 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXG1P55316 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXG1P55316 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXG1P55316 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXG1P55316 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
FOXG1P55316 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.29■□□□□ 0.84
FOXG1P55316 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXG1P55316 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXG1P55316 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.29■□□□□ 0.84
FOXG1P55316 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXG1P55316 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXG1P55316 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXG1P55316 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXG1P55316 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXG1P55316 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
FOXG1P55316 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXG1P55316 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXG1P55316 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
FOXG1P55316 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXG1P55316 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXG1P55316 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXG1P55316 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
FOXG1P55316 AL139125.2-201ENST00000623134 1869 ntBASIC20.28■□□□□ 0.84
FOXG1P55316 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXG1P55316 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXG1P55316 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXG1P55316 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FOXG1P55316 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXG1P55316 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXG1P55316 KRT16P3-201ENST00000439127 1283 ntBASIC20.27■□□□□ 0.84
FOXG1P55316 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXG1P55316 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXG1P55316 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXG1P55316 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
FOXG1P55316 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXG1P55316 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
FOXG1P55316 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXG1P55316 AC004448.1-201ENST00000458332 883 ntBASIC20.26■□□□□ 0.83
FOXG1P55316 AC010997.5-201ENST00000609182 354 ntBASIC20.26■□□□□ 0.83
FOXG1P55316 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms