Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YAL056C-AYAL056C-A 351 nt5.19□□□□□ -1.58
YNL040WP53960 MRI1YPR118W 1236 nt5.19□□□□□ -1.58
YNL040WP53960 MTC1YJL123C 1437 nt5.19□□□□□ -1.58
YNL040WP53960 RIM15YFL033C 5313 nt5.18□□□□□ -1.58
YNL040WP53960 MCX1YBR227C 1563 nt5.18□□□□□ -1.58
YNL040WP53960 YJL171CYJL171C 1191 nt5.18□□□□□ -1.58
YNL040WP53960 snR17bsnR17b 332 nt5.18□□□□□ -1.58
YNL040WP53960 ERG7YHR072W 2196 nt5.18□□□□□ -1.58
YNL040WP53960 GDB1YPR184W 4611 nt5.17□□□□□ -1.58
YNL040WP53960 MSH1YHR120W 2880 nt5.17□□□□□ -1.58
YNL040WP53960 ROT2YBR229C 2865 nt5.17□□□□□ -1.58
YNL040WP53960 AUA1YFL010W-A 285 nt5.17□□□□□ -1.58
YNL040WP53960 YGR035W-AYGR035W-A 222 nt5.17□□□□□ -1.58
YNL040WP53960 SFK1YKL051W 1062 nt5.17□□□□□ -1.58
YNL040WP53960 YML057C-AYML057C-A 390 nt5.17□□□□□ -1.58
YNL040WP53960 ETT1YOR051C 1239 nt5.17□□□□□ -1.58
YNL040WP53960 MET31YPL038W 534 nt5.17□□□□□ -1.58
YNL040WP53960 QCR2YPR191W 1107 nt5.17□□□□□ -1.58
YNL040WP53960 RCK1YGL158W 1539 nt5.17□□□□□ -1.58
YNL040WP53960 CAF4YKR036C 1932 nt5.17□□□□□ -1.58
YNL040WP53960 YNL095CYNL095C 1929 nt5.17□□□□□ -1.58
YNL040WP53960 BUD14YAR014C 2130 nt5.17□□□□□ -1.58
YNL040WP53960 CHL4YDR254W 1377 nt5.16□□□□□ -1.58
YNL040WP53960 NSG1YHR133C 876 nt5.16□□□□□ -1.58
YNL040WP53960 PRE7YBL041W 726 nt5.16□□□□□ -1.58
YNL040WP53960 EXO1YOR033C 2109 nt5.16□□□□□ -1.58
YNL040WP53960 AAP1YHR047C 2571 nt5.16□□□□□ -1.58
YNL040WP53960 YIL067CYIL067C 2037 nt5.15□□□□□ -1.58
YNL040WP53960 TRS23YDR246W 660 nt5.15□□□□□ -1.59
YNL040WP53960 YNL019CYNL019C 855 nt5.15□□□□□ -1.59
YNL040WP53960 YNL033WYNL033W 855 nt5.15□□□□□ -1.59
YNL040WP53960 RDL2YOR286W 450 nt5.15□□□□□ -1.59
YNL040WP53960 ECM33YBR078W 1290 nt5.15□□□□□ -1.59
YNL040WP53960 ACS2YLR153C 2052 nt5.15□□□□□ -1.59
YNL040WP53960 PWP1YLR196W 1731 nt5.14□□□□□ -1.59
YNL040WP53960 SIT1YEL065W 1887 nt5.14□□□□□ -1.59
YNL040WP53960 ADE3YGR204W 2841 nt5.14□□□□□ -1.59
YNL040WP53960 SET5YHR207C 1581 nt5.14□□□□□ -1.59
YNL040WP53960 SLC1YDL052C 912 nt5.14□□□□□ -1.59
YNL040WP53960 FAU1YER183C 636 nt5.14□□□□□ -1.59
YNL040WP53960 THI5YFL058W 1023 nt5.14□□□□□ -1.59
YNL040WP53960 MF(ALPHA)2YGL089C 363 nt5.14□□□□□ -1.59
YNL040WP53960 THI12YNL332W 1023 nt5.14□□□□□ -1.59
YNL040WP53960 RPO26YPR187W 468 nt5.14□□□□□ -1.59
YNL040WP53960 CDC28YBR160W 897 nt5.14□□□□□ -1.59
YNL040WP53960 AXL2YIL140W 2472 nt5.13□□□□□ -1.59
YNL040WP53960 RRP45YDR280W 918 nt5.13□□□□□ -1.59
YNL040WP53960 YFR052C-AYFR052C-A 306 nt5.13□□□□□ -1.59
YNL040WP53960 PUS6YGR169C 1215 nt5.13□□□□□ -1.59
YNL040WP53960 YMR245WYMR245W 621 nt5.13□□□□□ -1.59
YNL040WP53960 TOM5YPR133W-A 153 nt5.13□□□□□ -1.59
YNL040WP53960 HXT4YHR092C 1731 nt5.13□□□□□ -1.59
YNL040WP53960 DDC1YPL194W 1839 nt5.13□□□□□ -1.59
YNL040WP53960 tR(ACG)JtR(ACG)J 73 nt5.12□□□□□ -1.59
YNL040WP53960 tX(XXX)DtX(XXX)D 100 nt5.12□□□□□ -1.59
YNL040WP53960 NCS6YGL211W 1080 nt5.11□□□□□ -1.59
YNL040WP53960 NRM1YNR009W 750 nt5.11□□□□□ -1.59
YNL040WP53960 YHR182WYHR182W 2358 nt5.11□□□□□ -1.59
YNL040WP53960 VMS1YDR049W 1899 nt5.1□□□□□ -1.59
YNL040WP53960 MSS116YDR194C 1995 nt5.1□□□□□ -1.59
YNL040WP53960 YDR417CYDR417C 372 nt5.1□□□□□ -1.59
YNL040WP53960 YGL072CYGL072C 360 nt5.1□□□□□ -1.59
YNL040WP53960 PAP1YKR002W 1707 nt5.1□□□□□ -1.59
YNL040WP53960 UBX7YBR273C 1311 nt5.1□□□□□ -1.59
YNL040WP53960 CYK3YDL117W 2658 nt5.1□□□□□ -1.59
YNL040WP53960 TAH18YPR048W 1872 nt5.09□□□□□ -1.59
YNL040WP53960 TUB2YFL037W 1374 nt5.09□□□□□ -1.59
YNL040WP53960 TLG2YOL018C 1194 nt5.09□□□□□ -1.59
YNL040WP53960 SFT2YBL102W 648 nt5.09□□□□□ -1.59
YNL040WP53960 MNT2YGL257C 1677 nt5.08□□□□□ -1.6
YNL040WP53960 UGA2YBR006W 1494 nt5.08□□□□□ -1.6
YNL040WP53960 KRE6YPR159W 2163 nt5.08□□□□□ -1.6
YNL040WP53960 YAL044W-AYAL044W-A 333 nt5.08□□□□□ -1.6
YNL040WP53960 ZPS1YOL154W 750 nt5.08□□□□□ -1.6
YNL040WP53960 CKB2YOR039W 777 nt5.08□□□□□ -1.6
YNL040WP53960 APN1YKL114C 1104 nt5.07□□□□□ -1.6
YNL040WP53960 MDG1YNL173C 1101 nt5.07□□□□□ -1.6
YNL040WP53960 YNR042WYNR042W 429 nt5.07□□□□□ -1.6
YNL040WP53960 CUE5YOR042W 1236 nt5.07□□□□□ -1.6
YNL040WP53960 YOR342CYOR342C 960 nt5.07□□□□□ -1.6
YNL040WP53960 PDR10YOR328W 4695 nt5.07□□□□□ -1.6
YNL040WP53960 TDA7YNL176C 1911 nt5.07□□□□□ -1.6
YNL040WP53960 MMT2YPL224C 1455 nt5.07□□□□□ -1.6
YNL040WP53960 CRT10YOL063C 2874 nt5.06□□□□□ -1.6
YNL040WP53960 TUP1YCR084C 2142 nt5.06□□□□□ -1.6
YNL040WP53960 ARO10YDR380W 1908 nt5.06□□□□□ -1.6
YNL040WP53960 TRX2YGR209C 315 nt5.06□□□□□ -1.6
YNL040WP53960 YIR017W-AYIR017W-A 600 nt5.06□□□□□ -1.6
YNL040WP53960 JJJ3YJR097W 519 nt5.06□□□□□ -1.6
YNL040WP53960 DPB2YPR175W 2070 nt5.06□□□□□ -1.6
YNL040WP53960 YNL247WYNL247W 2304 nt5.06□□□□□ -1.6
YNL040WP53960 SER33YIL074C 1410 nt5.06□□□□□ -1.6
YNL040WP53960 YJR124CYJR124C 1347 nt5.05□□□□□ -1.6
YNL040WP53960 EMP46YLR080W 1335 nt5.05□□□□□ -1.6
YNL040WP53960 TFC7YOR110W 1308 nt5.05□□□□□ -1.6
YNL040WP53960 MIM2YLR099W-A 264 nt5.05□□□□□ -1.6
YNL040WP53960 MRP21YBL090W 534 nt5.05□□□□□ -1.6
YNL040WP53960 TRM10YOL093W 882 nt5.05□□□□□ -1.6
YNL040WP53960 CKA2YOR061W 1020 nt5.05□□□□□ -1.6
YNL040WP53960 YCL012CYCL012C 405 nt5.05□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms