Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGA2P52926 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HMGA2P52926 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGA2P52926 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGA2P52926 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.17■□□□□ 0.98
HMGA2P52926 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGA2P52926 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGA2P52926 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGA2P52926 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGA2P52926 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGA2P52926 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGA2P52926 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGA2P52926 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.17■□□□□ 0.98
HMGA2P52926 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGA2P52926 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGA2P52926 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.16■□□□□ 0.98
HMGA2P52926 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGA2P52926 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGA2P52926 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
HMGA2P52926 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.16■□□□□ 0.98
HMGA2P52926 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGA2P52926 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.16■□□□□ 0.98
HMGA2P52926 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGA2P52926 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HMGA2P52926 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HMGA2P52926 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGA2P52926 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGA2P52926 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGA2P52926 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGA2P52926 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGA2P52926 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGA2P52926 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGA2P52926 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGA2P52926 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.15■□□□□ 0.98
HMGA2P52926 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGA2P52926 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGA2P52926 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGA2P52926 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.14■□□□□ 0.97
HMGA2P52926 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGA2P52926 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.14■□□□□ 0.97
HMGA2P52926 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGA2P52926 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGA2P52926 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGA2P52926 AL161729.1-201ENST00000604104 1402 ntBASIC21.13■□□□□ 0.97
HMGA2P52926 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HMGA2P52926 ANOS2P-203ENST00000472227 1816 ntBASIC21.13■□□□□ 0.97
HMGA2P52926 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGA2P52926 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGA2P52926 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGA2P52926 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.13■□□□□ 0.97
HMGA2P52926 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HMGA2P52926 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.13■□□□□ 0.97
HMGA2P52926 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.13■□□□□ 0.97
HMGA2P52926 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGA2P52926 AC092068.2-201ENST00000590491 1708 ntBASIC21.12■□□□□ 0.97
HMGA2P52926 AL117328.2-201ENST00000624617 1940 ntBASIC21.12■□□□□ 0.97
HMGA2P52926 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGA2P52926 MIR7108-201ENST00000614319 87 ntBASIC21.12■□□□□ 0.97
HMGA2P52926 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGA2P52926 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HMGA2P52926 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.12■□□□□ 0.97
HMGA2P52926 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGA2P52926 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGA2P52926 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.11■□□□□ 0.97
HMGA2P52926 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HMGA2P52926 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGA2P52926 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.11■□□□□ 0.97
HMGA2P52926 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.11■□□□□ 0.97
HMGA2P52926 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGA2P52926 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.11■□□□□ 0.97
HMGA2P52926 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HMGA2P52926 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGA2P52926 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGA2P52926 DUSP8P3-201ENST00000399571 1760 ntBASIC21.1■□□□□ 0.97
HMGA2P52926 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
HMGA2P52926 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGA2P52926 AC090877.2-201ENST00000558441 1738 ntBASIC21.1■□□□□ 0.97
HMGA2P52926 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGA2P52926 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGA2P52926 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGA2P52926 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HMGA2P52926 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HMGA2P52926 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.1■□□□□ 0.97
HMGA2P52926 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGA2P52926 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGA2P52926 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.09■□□□□ 0.97
HMGA2P52926 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HMGA2P52926 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGA2P52926 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HMGA2P52926 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.09■□□□□ 0.97
HMGA2P52926 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HMGA2P52926 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
HMGA2P52926 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGA2P52926 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGA2P52926 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGA2P52926 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGA2P52926 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGA2P52926 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HMGA2P52926 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HMGA2P52926 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms