Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN4P51793 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN4P51793 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN4P51793 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN4P51793 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.51■■□□□ 1.51
CLCN4P51793 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.51■■□□□ 1.51
CLCN4P51793 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.51■■□□□ 1.51
CLCN4P51793 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN4P51793 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.51■■□□□ 1.51
CLCN4P51793 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CLCN4P51793 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CLCN4P51793 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLCN4P51793 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLCN4P51793 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CLCN4P51793 AC026271.2-201ENST00000428091 497 ntBASIC24.49■■□□□ 1.51
CLCN4P51793 AC005703.6-201ENST00000623265 1329 ntBASIC24.49■■□□□ 1.51
CLCN4P51793 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CLCN4P51793 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.49■■□□□ 1.51
CLCN4P51793 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CLCN4P51793 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CLCN4P51793 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CLCN4P51793 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CLCN4P51793 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CLCN4P51793 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CLCN4P51793 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLCN4P51793 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CLCN4P51793 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.48■■□□□ 1.51
CLCN4P51793 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CLCN4P51793 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CLCN4P51793 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.48■■□□□ 1.51
CLCN4P51793 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.48■■□□□ 1.51
CLCN4P51793 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLCN4P51793 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLCN4P51793 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLCN4P51793 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLCN4P51793 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLCN4P51793 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.47■■□□□ 1.51
CLCN4P51793 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.47■■□□□ 1.51
CLCN4P51793 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.46■■□□□ 1.51
CLCN4P51793 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLCN4P51793 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.46■■□□□ 1.51
CLCN4P51793 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.46■■□□□ 1.51
CLCN4P51793 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLCN4P51793 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.45■■□□□ 1.51
CLCN4P51793 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.45■■□□□ 1.51
CLCN4P51793 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
CLCN4P51793 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CLCN4P51793 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CLCN4P51793 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLCN4P51793 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLCN4P51793 DUX4L19-201ENST00000557448 1267 ntBASIC24.45■■□□□ 1.5
CLCN4P51793 AL136967.2-201ENST00000623968 743 ntBASIC24.45■■□□□ 1.5
CLCN4P51793 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLCN4P51793 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CLCN4P51793 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLCN4P51793 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLCN4P51793 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.44■■□□□ 1.5
CLCN4P51793 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CLCN4P51793 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.44■■□□□ 1.5
CLCN4P51793 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.44■■□□□ 1.5
CLCN4P51793 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.44■■□□□ 1.5
CLCN4P51793 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.44■■□□□ 1.5
CLCN4P51793 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
CLCN4P51793 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLCN4P51793 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CLCN4P51793 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
CLCN4P51793 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLCN4P51793 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.43■■□□□ 1.5
CLCN4P51793 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.43■■□□□ 1.5
CLCN4P51793 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.43■■□□□ 1.5
CLCN4P51793 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLCN4P51793 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.43■■□□□ 1.5
CLCN4P51793 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLCN4P51793 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.43■■□□□ 1.5
CLCN4P51793 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN4P51793 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN4P51793 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.42■■□□□ 1.5
CLCN4P51793 AC105265.2-201ENST00000467189 838 ntBASIC24.42■■□□□ 1.5
CLCN4P51793 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN4P51793 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
CLCN4P51793 AF213884.3-201ENST00000563833 479 ntBASIC24.42■■□□□ 1.5
CLCN4P51793 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CLCN4P51793 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.42■■□□□ 1.5
CLCN4P51793 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN4P51793 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.42■■□□□ 1.5
CLCN4P51793 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.42■■□□□ 1.5
CLCN4P51793 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CLCN4P51793 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLCN4P51793 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLCN4P51793 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLCN4P51793 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CLCN4P51793 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CLCN4P51793 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.41■■□□□ 1.5
CLCN4P51793 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.41■■□□□ 1.5
CLCN4P51793 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.41■■□□□ 1.5
CLCN4P51793 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLCN4P51793 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
CLCN4P51793 MIR939-201ENST00000401314 82 ntBASIC24.4■■□□□ 1.5
CLCN4P51793 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CLCN4P51793 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms