Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC1P51610 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.31■□□□□ 0.84
HCFC1P51610 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC1P51610 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.31■□□□□ 0.84
HCFC1P51610 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC1P51610 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCFC1P51610 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.31■□□□□ 0.84
HCFC1P51610 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.31■□□□□ 0.84
HCFC1P51610 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.3■□□□□ 0.84
HCFC1P51610 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HCFC1P51610 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HCFC1P51610 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCFC1P51610 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HCFC1P51610 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.3■□□□□ 0.84
HCFC1P51610 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.3■□□□□ 0.84
HCFC1P51610 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.3■□□□□ 0.84
HCFC1P51610 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HCFC1P51610 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC1P51610 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HCFC1P51610 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC1P51610 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.29■□□□□ 0.84
HCFC1P51610 AC092666.2-201ENST00000613287 246 ntBASIC20.29■□□□□ 0.84
HCFC1P51610 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.29■□□□□ 0.84
HCFC1P51610 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC1P51610 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.29■□□□□ 0.84
HCFC1P51610 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC1P51610 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC1P51610 AL355001.2-201ENST00000620617 1191 ntBASIC20.29■□□□□ 0.84
HCFC1P51610 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HCFC1P51610 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HCFC1P51610 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCFC1P51610 AL136967.2-201ENST00000623968 743 ntBASIC20.28■□□□□ 0.84
HCFC1P51610 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HCFC1P51610 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC1P51610 MIR939-201ENST00000401314 82 ntBASIC20.27■□□□□ 0.84
HCFC1P51610 MIR5787-201ENST00000611784 55 ntBASIC20.27■□□□□ 0.84
HCFC1P51610 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC1P51610 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC1P51610 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC1P51610 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HCFC1P51610 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HCFC1P51610 AC005703.6-201ENST00000623265 1329 ntBASIC20.27■□□□□ 0.83
HCFC1P51610 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HCFC1P51610 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.27■□□□□ 0.83
HCFC1P51610 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.27■□□□□ 0.83
HCFC1P51610 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
HCFC1P51610 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HCFC1P51610 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HCFC1P51610 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.26■□□□□ 0.83
HCFC1P51610 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.26■□□□□ 0.83
HCFC1P51610 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCFC1P51610 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
HCFC1P51610 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HCFC1P51610 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HCFC1P51610 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HCFC1P51610 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCFC1P51610 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCFC1P51610 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCFC1P51610 AC004448.1-201ENST00000458332 883 ntBASIC20.25■□□□□ 0.83
HCFC1P51610 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HCFC1P51610 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HCFC1P51610 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
HCFC1P51610 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
HCFC1P51610 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HCFC1P51610 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
HCFC1P51610 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HCFC1P51610 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HCFC1P51610 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HCFC1P51610 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.24■□□□□ 0.83
HCFC1P51610 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.24■□□□□ 0.83
HCFC1P51610 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCFC1P51610 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCFC1P51610 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCFC1P51610 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCFC1P51610 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCFC1P51610 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HCFC1P51610 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCFC1P51610 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCFC1P51610 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.22■□□□□ 0.83
HCFC1P51610 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCFC1P51610 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCFC1P51610 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HCFC1P51610 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCFC1P51610 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCFC1P51610 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HCFC1P51610 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
HCFC1P51610 SRD5A1P1-201ENST00000442297 786 ntBASIC20.22■□□□□ 0.83
HCFC1P51610 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HCFC1P51610 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCFC1P51610 AC131274.2-201ENST00000580697 1507 ntBASIC20.21■□□□□ 0.83
HCFC1P51610 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HCFC1P51610 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HCFC1P51610 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HCFC1P51610 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.21■□□□□ 0.83
HCFC1P51610 AC010501.1-201ENST00000606270 1962 ntBASIC20.21■□□□□ 0.83
HCFC1P51610 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HCFC1P51610 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.83
HCFC1P51610 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
HCFC1P51610 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.83
HCFC1P51610 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms