Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 DUX4L20-201ENST00000619712 1269 ntBASIC18.17■□□□□ 0.5
CDC34P49427 DUX4L21-201ENST00000622058 1269 ntBASIC18.17■□□□□ 0.5
CDC34P49427 DUX4L10-201ENST00000622460 1267 ntBASIC18.17■□□□□ 0.5
CDC34P49427 DUX4L25-201ENST00000624915 1269 ntBASIC18.17■□□□□ 0.5
CDC34P49427 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.17■□□□□ 0.5
CDC34P49427 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.17■□□□□ 0.5
CDC34P49427 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CDC34P49427 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC34P49427 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC34P49427 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC34P49427 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC34P49427 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC34P49427 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.17■□□□□ 0.5
CDC34P49427 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.16■□□□□ 0.5
CDC34P49427 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC34P49427 EP400NL-214ENST00000641289 2402 ntBASIC18.16■□□□□ 0.5
CDC34P49427 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDC34P49427 AC126177.7-201ENST00000547904 679 ntBASIC18.16■□□□□ 0.5
CDC34P49427 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDC34P49427 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.16■□□□□ 0.5
CDC34P49427 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.16■□□□□ 0.5
CDC34P49427 LINC00565-201ENST00000562710 2331 ntBASIC18.16■□□□□ 0.5
CDC34P49427 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC34P49427 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.15■□□□□ 0.5
CDC34P49427 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CDC34P49427 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDC34P49427 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC34P49427 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDC34P49427 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC34P49427 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC34P49427 AL162393.1-201ENST00000437852 946 ntBASIC18.15■□□□□ 0.5
CDC34P49427 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.15■□□□□ 0.5
CDC34P49427 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC34P49427 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.15■□□□□ 0.5
CDC34P49427 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDC34P49427 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC34P49427 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.15■□□□□ 0.5
CDC34P49427 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC34P49427 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDC34P49427 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC34P49427 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDC34P49427 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC34P49427 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC34P49427 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC34P49427 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC34P49427 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC34P49427 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.14■□□□□ 0.49
CDC34P49427 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC34P49427 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDC34P49427 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CDC34P49427 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.14■□□□□ 0.49
CDC34P49427 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC34P49427 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC34P49427 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC34P49427 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC34P49427 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDC34P49427 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDC34P49427 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.13■□□□□ 0.49
CDC34P49427 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC34P49427 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC34P49427 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC34P49427 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC34P49427 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CDC34P49427 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC34P49427 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC34P49427 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC34P49427 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC34P49427 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC34P49427 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC34P49427 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDC34P49427 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC34P49427 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC34P49427 HLA-V-202ENST00000446817 847 ntBASIC18.12■□□□□ 0.49
CDC34P49427 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC34P49427 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC34P49427 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC34P49427 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC34P49427 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC34P49427 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC34P49427 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDC34P49427 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC34P49427 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.11■□□□□ 0.49
CDC34P49427 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDC34P49427 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDC34P49427 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDC34P49427 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC34P49427 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC34P49427 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC34P49427 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDC34P49427 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDC34P49427 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.1■□□□□ 0.49
CDC34P49427 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC34P49427 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC34P49427 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC34P49427 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC34P49427 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.09■□□□□ 0.49
CDC34P49427 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC34P49427 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC34P49427 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDC34P49427 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms