Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC1A3P43003 AL033527.3-201ENST00000566366 1196 ntBASIC21.2■□□□□ 0.98
SLC1A3P43003 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SLC1A3P43003 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC1A3P43003 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A3P43003 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC1A3P43003 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A3P43003 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A3P43003 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SLC1A3P43003 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A3P43003 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC1A3P43003 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SLC1A3P43003 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A3P43003 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A3P43003 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A3P43003 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A3P43003 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC1A3P43003 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A3P43003 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A3P43003 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A3P43003 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A3P43003 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A3P43003 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC1A3P43003 AC011551.1-201ENST00000614101 683 ntBASIC21.17■□□□□ 0.98
SLC1A3P43003 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC1A3P43003 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC1A3P43003 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A3P43003 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC1A3P43003 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC1A3P43003 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A3P43003 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A3P43003 AC068473.5-201ENST00000616428 2072 ntBASIC21.17■□□□□ 0.98
SLC1A3P43003 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A3P43003 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A3P43003 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC1A3P43003 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A3P43003 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC1A3P43003 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A3P43003 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
SLC1A3P43003 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC1A3P43003 AC010980.1-201ENST00000587192 1142 ntBASIC21.16■□□□□ 0.98
SLC1A3P43003 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A3P43003 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SLC1A3P43003 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A3P43003 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A3P43003 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A3P43003 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A3P43003 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A3P43003 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A3P43003 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A3P43003 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC1A3P43003 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC1A3P43003 PVT1_1.1-201ENST00000615125 194 ntBASIC21.15■□□□□ 0.98
SLC1A3P43003 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A3P43003 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A3P43003 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A3P43003 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A3P43003 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A3P43003 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SLC1A3P43003 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC1A3P43003 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC1A3P43003 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC1A3P43003 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC1A3P43003 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.14■□□□□ 0.98
SLC1A3P43003 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.98
SLC1A3P43003 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A3P43003 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC1A3P43003 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SLC1A3P43003 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC1A3P43003 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.14■□□□□ 0.97
SLC1A3P43003 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A3P43003 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A3P43003 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A3P43003 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A3P43003 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A3P43003 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC1A3P43003 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A3P43003 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SLC1A3P43003 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SLC1A3P43003 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A3P43003 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SLC1A3P43003 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A3P43003 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC1A3P43003 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC1A3P43003 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC1A3P43003 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A3P43003 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC1A3P43003 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC1A3P43003 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC1A3P43003 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC1A3P43003 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SLC1A3P43003 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC1A3P43003 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC1A3P43003 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A3P43003 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A3P43003 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A3P43003 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SLC1A3P43003 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC1A3P43003 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC1A3P43003 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms