Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	YJR012C	YJR012C	624 nt		5.73	□□□□□ -1.49
SKP2	P42843	PMA1	YGL008C	2757 nt		5.73	□□□□□ -1.49
SKP2	P42843	PAT1	YCR077C	2391 nt		5.73	□□□□□ -1.49
SKP2	P42843	ABZ1	YNR033W	2364 nt		5.73	□□□□□ -1.49
SKP2	P42843	FAA4	YMR246W	2085 nt		5.73	□□□□□ -1.49
SKP2	P42843	YFL042C	YFL042C	2025 nt		5.72	□□□□□ -1.49
SKP2	P42843	PMT2	YAL023C	2280 nt		5.72	□□□□□ -1.49
SKP2	P42843	IPK1	YDR315C	846 nt		5.72	□□□□□ -1.49
SKP2	P42843	CTR2	YHR175W	570 nt		5.72	□□□□□ -1.49
SKP2	P42843	RHO3	YIL118W	696 nt		5.72	□□□□□ -1.49
SKP2	P42843	PEX12	YMR026C	1200 nt		5.72	□□□□□ -1.49
SKP2	P42843	SPC24	YMR117C	642 nt		5.72	□□□□□ -1.49
SKP2	P42843	OAZ1	YPL052W	879 nt		5.72	□□□□□ -1.49
SKP2	P42843	LAS21	YJL062W	2493 nt		5.72	□□□□□ -1.49
SKP2	P42843	RNR3	YIL066C	2610 nt		5.72	□□□□□ -1.49
SKP2	P42843	ACF2	YLR144C	2340 nt		5.71	□□□□□ -1.49
SKP2	P42843	YEH1	YLL012W	1722 nt		5.71	□□□□□ -1.49
SKP2	P42843	YKL107W	YKL107W	930 nt		5.71	□□□□□ -1.5
SKP2	P42843	YPL014W	YPL014W	1146 nt		5.71	□□□□□ -1.5
SKP2	P42843	MSH1	YHR120W	2880 nt		5.7	□□□□□ -1.5
SKP2	P42843	DBR1	YKL149C	1218 nt		5.7	□□□□□ -1.5
SKP2	P42843	VPS1	YKR001C	2115 nt		5.7	□□□□□ -1.5
SKP2	P42843	RBD2	YPL246C	789 nt		5.7	□□□□□ -1.5
SKP2	P42843	KTR5	YNL029C	1569 nt		5.7	□□□□□ -1.5
SKP2	P42843	NOP8	YOL144W	1455 nt		5.7	□□□□□ -1.5
SKP2	P42843	QDR3	YBR043C	2070 nt		5.7	□□□□□ -1.5
SKP2	P42843	CAB4	YGR277C	918 nt		5.69	□□□□□ -1.5
SKP2	P42843	snR34	snR34	203 nt		5.69	□□□□□ -1.5
SKP2	P42843	MPC54	YOR177C	1395 nt		5.68	□□□□□ -1.5
SKP2	P42843	ESC8	YOL017W	2145 nt		5.68	□□□□□ -1.5
SKP2	P42843	TDA6	YPR157W	1404 nt		5.68	□□□□□ -1.5
SKP2	P42843	PDE1	YGL248W	1110 nt		5.68	□□□□□ -1.5
SKP2	P42843	VPS29	YHR012W	849 nt		5.68	□□□□□ -1.5
SKP2	P42843	GEP5	YLR091W	882 nt		5.68	□□□□□ -1.5
SKP2	P42843	CKB2	YOR039W	777 nt		5.68	□□□□□ -1.5
SKP2	P42843	RPL3	YOR063W	1164 nt		5.68	□□□□□ -1.5
SKP2	P42843	ENV9	YOR246C	993 nt		5.68	□□□□□ -1.5
SKP2	P42843	FEX1	YOR390W	1128 nt		5.68	□□□□□ -1.5
SKP2	P42843	MGR2	YPL098C	342 nt		5.68	□□□□□ -1.5
SKP2	P42843	FEX2	YPL279C	1128 nt		5.68	□□□□□ -1.5
SKP2	P42843	MRL1	YPR079W	1146 nt		5.68	□□□□□ -1.5
SKP2	P42843	PIF1	YML061C	2580 nt		5.68	□□□□□ -1.5
SKP2	P42843	RPN6	YDL097C	1305 nt		5.68	□□□□□ -1.5
SKP2	P42843	LSG1	YGL099W	1923 nt		5.68	□□□□□ -1.5
SKP2	P42843	RMD9	YGL107C	1941 nt		5.68	□□□□□ -1.5
SKP2	P42843	HER2	YMR293C	1395 nt		5.67	□□□□□ -1.5
SKP2	P42843	UBX2	YML013W	1755 nt		5.67	□□□□□ -1.5
SKP2	P42843	HOF1	YMR032W	2010 nt		5.67	□□□□□ -1.5
SKP2	P42843	SAS4	YDR181C	1446 nt		5.67	□□□□□ -1.5
SKP2	P42843	CLB1	YGR108W	1416 nt		5.67	□□□□□ -1.5
SKP2	P42843	YDR541C	YDR541C	1035 nt		5.67	□□□□□ -1.5
SKP2	P42843	YMR114C	YMR114C	1107 nt		5.67	□□□□□ -1.5
SKP2	P42843	NOP13	YNL175C	1212 nt		5.67	□□□□□ -1.5
SKP2	P42843	ROX3	YBL093C	663 nt		5.67	□□□□□ -1.5
SKP2	P42843	URA7	YBL039C	1740 nt		5.67	□□□□□ -1.5
SKP2	P42843	EMP46	YLR080W	1335 nt		5.67	□□□□□ -1.5
SKP2	P42843	MPP10	YJR002W	1782 nt		5.67	□□□□□ -1.5
SKP2	P42843	KEL1	YHR158C	3495 nt		5.67	□□□□□ -1.5
SKP2	P42843	VBA1	YMR088C	1689 nt		5.66	□□□□□ -1.5
SKP2	P42843	HST4	YDR191W	1113 nt		5.66	□□□□□ -1.5
SKP2	P42843	MNN10	YDR245W	1182 nt		5.66	□□□□□ -1.5
SKP2	P42843	YEL074W	YEL074W	339 nt		5.66	□□□□□ -1.5
SKP2	P42843	PEX22	YAL055W	543 nt		5.66	□□□□□ -1.5
SKP2	P42843	SRV2	YNL138W	1581 nt		5.66	□□□□□ -1.5
SKP2	P42843	COQ6	YGR255C	1440 nt		5.65	□□□□□ -1.5
SKP2	P42843	URA3	YEL021W	804 nt		5.65	□□□□□ -1.5
SKP2	P42843	SKI8	YGL213C	1194 nt		5.65	□□□□□ -1.5
SKP2	P42843	VTA1	YLR181C	993 nt		5.65	□□□□□ -1.5
SKP2	P42843	NPT1	YOR209C	1290 nt		5.65	□□□□□ -1.5
SKP2	P42843	ATP1	YBL099W	1638 nt		5.65	□□□□□ -1.51
SKP2	P42843	ULA1	YPL003W	1389 nt		5.65	□□□□□ -1.51
SKP2	P42843	APJ1	YNL077W	1587 nt		5.64	□□□□□ -1.51
SKP2	P42843	YPT32	YGL210W	669 nt		5.64	□□□□□ -1.51
SKP2	P42843	EDC1	YGL222C	528 nt		5.64	□□□□□ -1.51
SKP2	P42843	YHR095W	YHR095W	495 nt		5.64	□□□□□ -1.51
SKP2	P42843	ADD66	YKL206C	804 nt		5.64	□□□□□ -1.51
SKP2	P42843	YGP1	YNL160W	1065 nt		5.64	□□□□□ -1.51
SKP2	P42843	TOM5	YPR133W-A	153 nt		5.64	□□□□□ -1.51
SKP2	P42843	BAP2	YBR068C	1830 nt		5.64	□□□□□ -1.51
SKP2	P42843	VMA13	YPR036W	1437 nt		5.64	□□□□□ -1.51
SKP2	P42843	VPS70	YJR126C	2436 nt		5.64	□□□□□ -1.51
SKP2	P42843	CLB2	YPR119W	1476 nt		5.64	□□□□□ -1.51
SKP2	P42843	DRN1	YGR093W	1524 nt		5.64	□□□□□ -1.51
SKP2	P42843	snR57	snR57	88 nt		5.63	□□□□□ -1.51
SKP2	P42843	MSA2	YKR077W	1092 nt		5.63	□□□□□ -1.51
SKP2	P42843	OSW5	YMR148W	447 nt		5.63	□□□□□ -1.51
SKP2	P42843	FES1	YBR101C	873 nt		5.63	□□□□□ -1.51
SKP2	P42843	YMR111C	YMR111C	1389 nt		5.63	□□□□□ -1.51
SKP2	P42843	GUA1	YMR217W	1578 nt		5.63	□□□□□ -1.51
SKP2	P42843	KEX2	YNL238W	2445 nt		5.63	□□□□□ -1.51
SKP2	P42843	MTQ2	YDR140W	666 nt		5.62	□□□□□ -1.51
SKP2	P42843	RTN1	YDR233C	888 nt		5.62	□□□□□ -1.51
SKP2	P42843	SPO74	YGL170C	1242 nt		5.62	□□□□□ -1.51
SKP2	P42843	YGR066C	YGR066C	879 nt		5.62	□□□□□ -1.51
SKP2	P42843	RPP0	YLR340W	939 nt		5.62	□□□□□ -1.51
SKP2	P42843	YNL234W	YNL234W	1281 nt		5.62	□□□□□ -1.51
SKP2	P42843	VHS1	YDR247W	1386 nt		5.62	□□□□□ -1.51
SKP2	P42843	MST1	YKL194C	1389 nt		5.62	□□□□□ -1.51
SKP2	P42843	ARB1	YER036C	1833 nt		5.62	□□□□□ -1.51
SKP2	P42843	ENT2	YLR206W	1842 nt		5.62	□□□□□ -1.51

Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms