Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.77■□□□□ 0.6
CEACAM3P40198 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CEACAM3P40198 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.77■□□□□ 0.6
CEACAM3P40198 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CEACAM3P40198 AL161729.1-201ENST00000604104 1402 ntBASIC18.77■□□□□ 0.6
CEACAM3P40198 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.77■□□□□ 0.6
CEACAM3P40198 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.77■□□□□ 0.6
CEACAM3P40198 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CEACAM3P40198 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CEACAM3P40198 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.77■□□□□ 0.6
CEACAM3P40198 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CEACAM3P40198 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.77■□□□□ 0.6
CEACAM3P40198 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CEACAM3P40198 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CEACAM3P40198 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CEACAM3P40198 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.77■□□□□ 0.59
CEACAM3P40198 HLA-L-211ENST00000482052 1765 ntBASIC18.76■□□□□ 0.59
CEACAM3P40198 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.76■□□□□ 0.59
CEACAM3P40198 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.76■□□□□ 0.59
CEACAM3P40198 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CEACAM3P40198 AL451085.2-201ENST00000605085 799 ntBASIC18.76■□□□□ 0.59
CEACAM3P40198 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.76■□□□□ 0.59
CEACAM3P40198 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CEACAM3P40198 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CEACAM3P40198 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.75■□□□□ 0.59
CEACAM3P40198 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CEACAM3P40198 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.75■□□□□ 0.59
CEACAM3P40198 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CEACAM3P40198 AL022069.1-201ENST00000568025 1636 ntBASIC18.75■□□□□ 0.59
CEACAM3P40198 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CEACAM3P40198 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.75■□□□□ 0.59
CEACAM3P40198 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.75■□□□□ 0.59
CEACAM3P40198 AC009299.2-201ENST00000482477 511 ntBASIC18.75■□□□□ 0.59
CEACAM3P40198 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.75■□□□□ 0.59
CEACAM3P40198 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.75■□□□□ 0.59
CEACAM3P40198 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CEACAM3P40198 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.74■□□□□ 0.59
CEACAM3P40198 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.74■□□□□ 0.59
CEACAM3P40198 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CEACAM3P40198 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 AC141586.4-201ENST00000624558 1573 ntBASIC18.74■□□□□ 0.59
CEACAM3P40198 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.74■□□□□ 0.59
CEACAM3P40198 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.74■□□□□ 0.59
CEACAM3P40198 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CEACAM3P40198 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CEACAM3P40198 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CEACAM3P40198 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CEACAM3P40198 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CEACAM3P40198 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.73■□□□□ 0.59
CEACAM3P40198 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CEACAM3P40198 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.73■□□□□ 0.59
CEACAM3P40198 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CEACAM3P40198 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CEACAM3P40198 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CEACAM3P40198 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CEACAM3P40198 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CEACAM3P40198 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.73■□□□□ 0.59
CEACAM3P40198 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CEACAM3P40198 AF131216.4-201ENST00000638924 1588 ntBASIC18.72■□□□□ 0.59
CEACAM3P40198 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CEACAM3P40198 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CEACAM3P40198 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CEACAM3P40198 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CEACAM3P40198 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.72■□□□□ 0.59
CEACAM3P40198 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.72■□□□□ 0.59
CEACAM3P40198 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CEACAM3P40198 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CEACAM3P40198 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM3P40198 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM3P40198 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM3P40198 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CEACAM3P40198 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CEACAM3P40198 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM3P40198 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CEACAM3P40198 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM3P40198 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CEACAM3P40198 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.71■□□□□ 0.59
CEACAM3P40198 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.7■□□□□ 0.58
CEACAM3P40198 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM3P40198 AC021242.3-201ENST00000607598 1377 ntBASIC18.7■□□□□ 0.58
CEACAM3P40198 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM3P40198 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM3P40198 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM3P40198 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CEACAM3P40198 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.7■□□□□ 0.58
CEACAM3P40198 AL035685.1-201ENST00000636663 812 ntBASIC18.7■□□□□ 0.58
CEACAM3P40198 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM3P40198 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM3P40198 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.7■□□□□ 0.58
CEACAM3P40198 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CEACAM3P40198 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms