Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOX6P35712 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOX6P35712 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SOX6P35712 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.62■□□□□ 0.89
SOX6P35712 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SOX6P35712 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOX6P35712 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SOX6P35712 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX6P35712 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX6P35712 AL024507.2-201ENST00000606070 2574 ntBASIC20.62■□□□□ 0.89
SOX6P35712 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX6P35712 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOX6P35712 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX6P35712 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX6P35712 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX6P35712 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX6P35712 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SOX6P35712 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX6P35712 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
SOX6P35712 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX6P35712 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX6P35712 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX6P35712 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SOX6P35712 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX6P35712 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.61■□□□□ 0.89
SOX6P35712 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX6P35712 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX6P35712 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.61■□□□□ 0.89
SOX6P35712 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SOX6P35712 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX6P35712 LINC00526-201ENST00000581067 1875 ntBASIC20.6■□□□□ 0.89
SOX6P35712 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SOX6P35712 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX6P35712 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SOX6P35712 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.6■□□□□ 0.89
SOX6P35712 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.6■□□□□ 0.89
SOX6P35712 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.6■□□□□ 0.89
SOX6P35712 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SOX6P35712 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX6P35712 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.6■□□□□ 0.89
SOX6P35712 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX6P35712 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX6P35712 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SOX6P35712 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SOX6P35712 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.59■□□□□ 0.89
SOX6P35712 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.59■□□□□ 0.89
SOX6P35712 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX6P35712 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.59■□□□□ 0.89
SOX6P35712 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.58■□□□□ 0.89
SOX6P35712 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX6P35712 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX6P35712 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.58■□□□□ 0.89
SOX6P35712 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX6P35712 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX6P35712 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX6P35712 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SOX6P35712 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.58■□□□□ 0.89
SOX6P35712 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SOX6P35712 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX6P35712 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.58■□□□□ 0.88
SOX6P35712 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.57■□□□□ 0.88
SOX6P35712 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX6P35712 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SOX6P35712 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.57■□□□□ 0.88
SOX6P35712 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX6P35712 AC021231.2-201ENST00000594613 730 ntBASIC20.57■□□□□ 0.88
SOX6P35712 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX6P35712 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
SOX6P35712 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SOX6P35712 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX6P35712 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX6P35712 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.56■□□□□ 0.88
SOX6P35712 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX6P35712 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SOX6P35712 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.56■□□□□ 0.88
SOX6P35712 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SOX6P35712 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 MIR6089-201ENST00000616698 64 ntBASIC20.56■□□□□ 0.88
SOX6P35712 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX6P35712 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX6P35712 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX6P35712 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SOX6P35712 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SOX6P35712 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX6P35712 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX6P35712 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX6P35712 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.55■□□□□ 0.88
SOX6P35712 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.55■□□□□ 0.88
SOX6P35712 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SOX6P35712 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.55■□□□□ 0.88
SOX6P35712 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms