Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.53■□□□□ 0.72
COL8A2P25067 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.53■□□□□ 0.72
COL8A2P25067 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL8A2P25067 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.53■□□□□ 0.72
COL8A2P25067 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.53■□□□□ 0.72
COL8A2P25067 AC020928.2-201ENST00000588717 2197 ntBASIC19.53■□□□□ 0.72
COL8A2P25067 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL8A2P25067 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL8A2P25067 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL8A2P25067 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL8A2P25067 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.52■□□□□ 0.72
COL8A2P25067 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL8A2P25067 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.52■□□□□ 0.72
COL8A2P25067 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.52■□□□□ 0.72
COL8A2P25067 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.52■□□□□ 0.72
COL8A2P25067 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.52■□□□□ 0.72
COL8A2P25067 MIR3621-201ENST00000580529 85 ntBASIC19.52■□□□□ 0.72
COL8A2P25067 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL8A2P25067 AL356740.2-201ENST00000601559 647 ntBASIC19.52■□□□□ 0.72
COL8A2P25067 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.52■□□□□ 0.72
COL8A2P25067 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL8A2P25067 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL8A2P25067 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL8A2P25067 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL8A2P25067 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.51■□□□□ 0.71
COL8A2P25067 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL8A2P25067 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL8A2P25067 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.51■□□□□ 0.71
COL8A2P25067 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.51■□□□□ 0.71
COL8A2P25067 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.51■□□□□ 0.71
COL8A2P25067 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.51■□□□□ 0.71
COL8A2P25067 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COL8A2P25067 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL8A2P25067 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL8A2P25067 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL8A2P25067 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL8A2P25067 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL8A2P25067 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.5■□□□□ 0.71
COL8A2P25067 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.5■□□□□ 0.71
COL8A2P25067 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.5■□□□□ 0.71
COL8A2P25067 MIR6089-201ENST00000616698 64 ntBASIC19.5■□□□□ 0.71
COL8A2P25067 MIR6722-201ENST00000617286 78 ntBASIC19.5■□□□□ 0.71
COL8A2P25067 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.5■□□□□ 0.71
COL8A2P25067 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL8A2P25067 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL8A2P25067 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL8A2P25067 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.49■□□□□ 0.71
COL8A2P25067 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
COL8A2P25067 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.49■□□□□ 0.71
COL8A2P25067 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.49■□□□□ 0.71
COL8A2P25067 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.49■□□□□ 0.71
COL8A2P25067 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL8A2P25067 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL8A2P25067 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL8A2P25067 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL8A2P25067 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL8A2P25067 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL8A2P25067 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL8A2P25067 AC131281.2-201ENST00000520478 145 ntBASIC19.49■□□□□ 0.71
COL8A2P25067 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.49■□□□□ 0.71
COL8A2P25067 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
COL8A2P25067 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL8A2P25067 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL8A2P25067 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL8A2P25067 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL8A2P25067 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL8A2P25067 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.48■□□□□ 0.71
COL8A2P25067 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.48■□□□□ 0.71
COL8A2P25067 AC004448.1-201ENST00000458332 883 ntBASIC19.48■□□□□ 0.71
COL8A2P25067 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.48■□□□□ 0.71
COL8A2P25067 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.48■□□□□ 0.71
COL8A2P25067 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.48■□□□□ 0.71
COL8A2P25067 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.48■□□□□ 0.71
COL8A2P25067 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL8A2P25067 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.48■□□□□ 0.71
COL8A2P25067 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL8A2P25067 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL8A2P25067 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL8A2P25067 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL8A2P25067 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COL8A2P25067 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL8A2P25067 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.47■□□□□ 0.71
COL8A2P25067 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL8A2P25067 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL8A2P25067 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.47■□□□□ 0.71
COL8A2P25067 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.47■□□□□ 0.71
COL8A2P25067 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL8A2P25067 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL8A2P25067 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL8A2P25067 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL8A2P25067 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.47■□□□□ 0.71
COL8A2P25067 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL8A2P25067 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL8A2P25067 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.46■□□□□ 0.71
COL8A2P25067 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.46■□□□□ 0.71
COL8A2P25067 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
COL8A2P25067 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL8A2P25067 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL8A2P25067 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL8A2P25067 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms