Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.41■■□□□ 1.5
MMP8P22894 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
MMP8P22894 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
MMP8P22894 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.41■■□□□ 1.5
MMP8P22894 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
MMP8P22894 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
MMP8P22894 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.41■■□□□ 1.5
MMP8P22894 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.4■■□□□ 1.5
MMP8P22894 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MMP8P22894 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MMP8P22894 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MMP8P22894 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
MMP8P22894 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MMP8P22894 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.4■■□□□ 1.5
MMP8P22894 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MMP8P22894 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.4■■□□□ 1.5
MMP8P22894 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MMP8P22894 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
MMP8P22894 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
MMP8P22894 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.39■■□□□ 1.49
MMP8P22894 THA1P-201ENST00000590384 1145 ntBASIC24.39■■□□□ 1.49
MMP8P22894 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.39■■□□□ 1.49
MMP8P22894 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
MMP8P22894 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
MMP8P22894 ABCB10P4-201ENST00000566803 2184 ntBASIC24.39■■□□□ 1.49
MMP8P22894 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
MMP8P22894 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.38■■□□□ 1.49
MMP8P22894 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MMP8P22894 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
MMP8P22894 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.38■■□□□ 1.49
MMP8P22894 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MMP8P22894 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
MMP8P22894 AL161729.1-201ENST00000604104 1402 ntBASIC24.37■■□□□ 1.49
MMP8P22894 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
MMP8P22894 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
MMP8P22894 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.37■■□□□ 1.49
MMP8P22894 MIR4281-201ENST00000580852 62 ntBASIC24.37■■□□□ 1.49
MMP8P22894 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.37■■□□□ 1.49
MMP8P22894 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
MMP8P22894 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MMP8P22894 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MMP8P22894 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MMP8P22894 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MMP8P22894 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
MMP8P22894 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
MMP8P22894 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MMP8P22894 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
MMP8P22894 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.36■■□□□ 1.49
MMP8P22894 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
MMP8P22894 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MMP8P22894 KRT8P33-201ENST00000508125 1423 ntBASIC24.35■■□□□ 1.49
MMP8P22894 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MMP8P22894 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MMP8P22894 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MMP8P22894 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.35■■□□□ 1.49
MMP8P22894 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MMP8P22894 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.35■■□□□ 1.49
MMP8P22894 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
MMP8P22894 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.34■■□□□ 1.49
MMP8P22894 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
MMP8P22894 AF131216.4-201ENST00000638924 1588 ntBASIC24.34■■□□□ 1.49
MMP8P22894 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MMP8P22894 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
MMP8P22894 AC103724.3-201ENST00000564481 992 ntBASIC24.34■■□□□ 1.49
MMP8P22894 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
MMP8P22894 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.34■■□□□ 1.49
MMP8P22894 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
MMP8P22894 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
MMP8P22894 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MMP8P22894 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MMP8P22894 YBX1P4-201ENST00000392794 808 ntBASIC24.33■■□□□ 1.49
MMP8P22894 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MMP8P22894 AC131274.2-201ENST00000580697 1507 ntBASIC24.33■■□□□ 1.49
MMP8P22894 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.33■■□□□ 1.48
MMP8P22894 AL022069.1-201ENST00000568025 1636 ntBASIC24.32■■□□□ 1.48
MMP8P22894 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
MMP8P22894 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
MMP8P22894 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
MMP8P22894 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
MMP8P22894 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MMP8P22894 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MMP8P22894 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.31■■□□□ 1.48
MMP8P22894 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
MMP8P22894 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MMP8P22894 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
MMP8P22894 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MMP8P22894 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.31■■□□□ 1.48
MMP8P22894 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MMP8P22894 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MMP8P22894 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
MMP8P22894 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
MMP8P22894 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
MMP8P22894 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
MMP8P22894 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.3■■□□□ 1.48
MMP8P22894 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
MMP8P22894 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
MMP8P22894 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
MMP8P22894 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.29■■□□□ 1.48
MMP8P22894 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
MMP8P22894 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms