Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HIST1H1CP16403 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
HIST1H1CP16403 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
HIST1H1CP16403 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.72■□□□□ 0.91
HIST1H1CP16403 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H1CP16403 RARRES2P2-201ENST00000394842 485 ntBASIC20.72■□□□□ 0.91
HIST1H1CP16403 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.72■□□□□ 0.91
HIST1H1CP16403 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.72■□□□□ 0.91
HIST1H1CP16403 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H1CP16403 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H1CP16403 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H1CP16403 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H1CP16403 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H1CP16403 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H1CP16403 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.71■□□□□ 0.91
HIST1H1CP16403 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H1CP16403 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.71■□□□□ 0.91
HIST1H1CP16403 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H1CP16403 AC068473.5-201ENST00000616428 2072 ntBASIC20.71■□□□□ 0.91
HIST1H1CP16403 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H1CP16403 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HIST1H1CP16403 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H1CP16403 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.7■□□□□ 0.9
HIST1H1CP16403 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.7■□□□□ 0.9
HIST1H1CP16403 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H1CP16403 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H1CP16403 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.7■□□□□ 0.9
HIST1H1CP16403 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.7■□□□□ 0.9
HIST1H1CP16403 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.7■□□□□ 0.9
HIST1H1CP16403 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HIST1H1CP16403 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H1CP16403 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
HIST1H1CP16403 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H1CP16403 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H1CP16403 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H1CP16403 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H1CP16403 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H1CP16403 AL592295.1-201ENST00000400984 884 ntBASIC20.69■□□□□ 0.9
HIST1H1CP16403 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
HIST1H1CP16403 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H1CP16403 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H1CP16403 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H1CP16403 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H1CP16403 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.68■□□□□ 0.9
HIST1H1CP16403 U85056.1-201ENST00000616429 682 ntBASIC20.68■□□□□ 0.9
HIST1H1CP16403 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H1CP16403 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HIST1H1CP16403 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H1CP16403 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H1CP16403 AC012676.1-201ENST00000574705 1949 ntBASIC20.67■□□□□ 0.9
HIST1H1CP16403 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H1CP16403 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H1CP16403 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H1CP16403 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.67■□□□□ 0.9
HIST1H1CP16403 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H1CP16403 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H1CP16403 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H1CP16403 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.66■□□□□ 0.9
HIST1H1CP16403 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H1CP16403 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HIST1H1CP16403 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HIST1H1CP16403 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.66■□□□□ 0.9
HIST1H1CP16403 HSD17B1P1-201ENST00000590052 955 ntBASIC20.66■□□□□ 0.9
HIST1H1CP16403 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H1CP16403 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H1CP16403 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H1CP16403 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.65■□□□□ 0.9
HIST1H1CP16403 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HIST1H1CP16403 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST1H1CP16403 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H1CP16403 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST1H1CP16403 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H1CP16403 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.65■□□□□ 0.9
HIST1H1CP16403 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HIST1H1CP16403 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H1CP16403 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HIST1H1CP16403 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HIST1H1CP16403 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.64■□□□□ 0.89
HIST1H1CP16403 AC129492.7-201ENST00000622992 756 ntBASIC20.64■□□□□ 0.89
HIST1H1CP16403 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.64■□□□□ 0.89
HIST1H1CP16403 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H1CP16403 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H1CP16403 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H1CP16403 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HIST1H1CP16403 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H1CP16403 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H1CP16403 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.63■□□□□ 0.89
HIST1H1CP16403 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HIST1H1CP16403 LONRF2P2-201ENST00000439212 571 ntBASIC20.63■□□□□ 0.89
HIST1H1CP16403 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H1CP16403 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HIST1H1CP16403 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H1CP16403 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.62■□□□□ 0.89
HIST1H1CP16403 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H1CP16403 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST1H1CP16403 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H1CP16403 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H1CP16403 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H1CP16403 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H1CP16403 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms