Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL11A2P13942 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.81■■■□□ 2.2
COL11A2P13942 SYT6-210ENST00000641643 1587 ntBASIC28.81■■■□□ 2.2
COL11A2P13942 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL11A2P13942 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL11A2P13942 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.8■■■□□ 2.2
COL11A2P13942 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL11A2P13942 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.8■■■□□ 2.2
COL11A2P13942 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
COL11A2P13942 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
COL11A2P13942 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.8■■■□□ 2.2
COL11A2P13942 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL11A2P13942 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL11A2P13942 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.79■■■□□ 2.2
COL11A2P13942 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
COL11A2P13942 HACD1-201ENST00000326961 773 ntTSL 2 BASIC28.78■■■□□ 2.2
COL11A2P13942 AC099791.1-201ENST00000416440 715 ntBASIC28.78■■■□□ 2.2
COL11A2P13942 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC28.78■■■□□ 2.2
COL11A2P13942 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
COL11A2P13942 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
COL11A2P13942 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL11A2P13942 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL11A2P13942 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
COL11A2P13942 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
COL11A2P13942 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL11A2P13942 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL11A2P13942 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.77■■■□□ 2.2
COL11A2P13942 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL11A2P13942 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.76■■■□□ 2.2
COL11A2P13942 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
COL11A2P13942 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.76■■■□□ 2.19
COL11A2P13942 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL11A2P13942 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
COL11A2P13942 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
COL11A2P13942 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC28.75■■■□□ 2.19
COL11A2P13942 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
COL11A2P13942 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
COL11A2P13942 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
COL11A2P13942 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
COL11A2P13942 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
COL11A2P13942 AC099791.2-201ENST00000605725 427 ntBASIC28.74■■■□□ 2.19
COL11A2P13942 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL11A2P13942 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
COL11A2P13942 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL11A2P13942 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL11A2P13942 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL11A2P13942 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL11A2P13942 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
COL11A2P13942 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.74■■■□□ 2.19
COL11A2P13942 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.74■■■□□ 2.19
COL11A2P13942 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL11A2P13942 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL11A2P13942 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL11A2P13942 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.73■■■□□ 2.19
COL11A2P13942 AC090192.1-201ENST00000517740 490 ntBASIC28.72■■■□□ 2.19
COL11A2P13942 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.72■■■□□ 2.19
COL11A2P13942 IKBKGP1-201ENST00000612193 1073 ntBASIC28.72■■■□□ 2.19
COL11A2P13942 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
COL11A2P13942 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.72■■■□□ 2.19
COL11A2P13942 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
COL11A2P13942 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.72■■■□□ 2.19
COL11A2P13942 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
COL11A2P13942 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
COL11A2P13942 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.71■■■□□ 2.19
COL11A2P13942 C17orf82-201ENST00000623772 1530 ntBASIC28.71■■■□□ 2.19
COL11A2P13942 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COL11A2P13942 AC006455.2-201ENST00000429931 906 ntBASIC28.71■■■□□ 2.19
COL11A2P13942 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.71■■■□□ 2.19
COL11A2P13942 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
COL11A2P13942 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
COL11A2P13942 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
COL11A2P13942 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
COL11A2P13942 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.7■■■□□ 2.19
COL11A2P13942 AC008764.7-201ENST00000593779 1081 ntBASIC28.7■■■□□ 2.19
COL11A2P13942 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL11A2P13942 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.7■■■□□ 2.18
COL11A2P13942 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
COL11A2P13942 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
COL11A2P13942 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL11A2P13942 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.69■■■□□ 2.18
COL11A2P13942 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
COL11A2P13942 AL031602.1-201ENST00000633169 911 ntBASIC28.69■■■□□ 2.18
COL11A2P13942 AC010501.1-201ENST00000606270 1962 ntBASIC28.69■■■□□ 2.18
COL11A2P13942 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.69■■■□□ 2.18
COL11A2P13942 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL11A2P13942 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
COL11A2P13942 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL11A2P13942 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
COL11A2P13942 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.68■■■□□ 2.18
COL11A2P13942 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.68■■■□□ 2.18
COL11A2P13942 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
COL11A2P13942 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.68■■■□□ 2.18
COL11A2P13942 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.68■■■□□ 2.18
COL11A2P13942 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.68■■■□□ 2.18
COL11A2P13942 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.68■■■□□ 2.18
COL11A2P13942 AC136469.2-201ENST00000623944 1028 ntBASIC28.68■■■□□ 2.18
COL11A2P13942 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.68■■■□□ 2.18
COL11A2P13942 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
COL11A2P13942 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
COL11A2P13942 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms