Protein–RNA interactions for Protein: P08118

MSMB, Beta-microseminoprotein, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSMBP08118 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSMBP08118 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MSMBP08118 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSMBP08118 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
MSMBP08118 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MSMBP08118 AL136162.1-201ENST00000607711 1078 ntBASIC19.02■□□□□ 0.64
MSMBP08118 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
MSMBP08118 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSMBP08118 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MSMBP08118 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MSMBP08118 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
MSMBP08118 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.02■□□□□ 0.63
MSMBP08118 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MSMBP08118 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MSMBP08118 SLC6A10P-202ENST00000431994 2058 ntBASIC19.01■□□□□ 0.63
MSMBP08118 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSMBP08118 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.01■□□□□ 0.63
MSMBP08118 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
MSMBP08118 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.01■□□□□ 0.63
MSMBP08118 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.01■□□□□ 0.63
MSMBP08118 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.01■□□□□ 0.63
MSMBP08118 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MSMBP08118 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSMBP08118 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSMBP08118 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19■□□□□ 0.63
MSMBP08118 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19■□□□□ 0.63
MSMBP08118 DUSP8P4-201ENST00000399538 1761 ntBASIC19■□□□□ 0.63
MSMBP08118 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSMBP08118 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSMBP08118 AC135279.3-201ENST00000610945 1311 ntBASIC19■□□□□ 0.63
MSMBP08118 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MSMBP08118 AC142381.2-201ENST00000566120 298 ntBASIC18.99■□□□□ 0.63
MSMBP08118 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.99■□□□□ 0.63
MSMBP08118 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MSMBP08118 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MSMBP08118 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSMBP08118 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSMBP08118 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSMBP08118 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.98■□□□□ 0.63
MSMBP08118 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.98■□□□□ 0.63
MSMBP08118 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSMBP08118 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.98■□□□□ 0.63
MSMBP08118 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.98■□□□□ 0.63
MSMBP08118 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSMBP08118 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSMBP08118 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
MSMBP08118 MIR6089-201ENST00000616698 64 ntBASIC18.98■□□□□ 0.63
MSMBP08118 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSMBP08118 AC131274.2-201ENST00000580697 1507 ntBASIC18.98■□□□□ 0.63
MSMBP08118 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
MSMBP08118 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSMBP08118 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSMBP08118 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSMBP08118 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSMBP08118 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSMBP08118 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MSMBP08118 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.97■□□□□ 0.63
MSMBP08118 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.97■□□□□ 0.63
MSMBP08118 DUX4L19-201ENST00000557448 1267 ntBASIC18.97■□□□□ 0.63
MSMBP08118 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.97■□□□□ 0.63
MSMBP08118 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSMBP08118 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MSMBP08118 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.96■□□□□ 0.63
MSMBP08118 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MSMBP08118 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSMBP08118 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MSMBP08118 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSMBP08118 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSMBP08118 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.96■□□□□ 0.63
MSMBP08118 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MSMBP08118 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.96■□□□□ 0.63
MSMBP08118 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSMBP08118 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSMBP08118 AL022069.1-201ENST00000568025 1636 ntBASIC18.96■□□□□ 0.63
MSMBP08118 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
MSMBP08118 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSMBP08118 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.95■□□□□ 0.62
MSMBP08118 AC092171.4-201ENST00000609130 632 ntBASIC18.95■□□□□ 0.62
MSMBP08118 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.95■□□□□ 0.62
MSMBP08118 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSMBP08118 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSMBP08118 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.95■□□□□ 0.62
MSMBP08118 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSMBP08118 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSMBP08118 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSMBP08118 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MSMBP08118 EDA-201ENST00000338901 1233 ntBASIC18.94■□□□□ 0.62
MSMBP08118 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.94■□□□□ 0.62
MSMBP08118 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
MSMBP08118 AC024257.2-201ENST00000549699 147 ntBASIC18.94■□□□□ 0.62
MSMBP08118 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.94■□□□□ 0.62
MSMBP08118 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
MSMBP08118 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.94■□□□□ 0.62
MSMBP08118 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.94■□□□□ 0.62
MSMBP08118 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MSMBP08118 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSMBP08118 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MSMBP08118 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSMBP08118 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.93■□□□□ 0.62
MSMBP08118 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms