Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.27■■□□□ 1
THBS1P07996 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.27■■□□□ 1
THBS1P07996 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.27■■□□□ 1
THBS1P07996 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.27■■□□□ 1
THBS1P07996 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
THBS1P07996 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.27■■□□□ 1
THBS1P07996 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
THBS1P07996 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.27■□□□□ 0.99
THBS1P07996 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
THBS1P07996 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
THBS1P07996 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
THBS1P07996 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
THBS1P07996 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
THBS1P07996 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
THBS1P07996 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.26■□□□□ 0.99
THBS1P07996 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
THBS1P07996 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.26■□□□□ 0.99
THBS1P07996 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
THBS1P07996 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
THBS1P07996 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
THBS1P07996 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.25■□□□□ 0.99
THBS1P07996 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
THBS1P07996 AC074183.2-201ENST00000623112 922 ntBASIC21.25■□□□□ 0.99
THBS1P07996 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
THBS1P07996 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.24■□□□□ 0.99
THBS1P07996 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
THBS1P07996 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
THBS1P07996 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
THBS1P07996 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
THBS1P07996 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
THBS1P07996 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
THBS1P07996 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.24■□□□□ 0.99
THBS1P07996 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
THBS1P07996 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
THBS1P07996 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
THBS1P07996 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
THBS1P07996 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
THBS1P07996 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
THBS1P07996 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
THBS1P07996 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
THBS1P07996 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
THBS1P07996 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
THBS1P07996 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
THBS1P07996 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
THBS1P07996 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
THBS1P07996 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
THBS1P07996 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
THBS1P07996 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.22■□□□□ 0.99
THBS1P07996 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.22■□□□□ 0.99
THBS1P07996 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
THBS1P07996 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
THBS1P07996 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.22■□□□□ 0.99
THBS1P07996 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
THBS1P07996 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
THBS1P07996 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
THBS1P07996 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.22■□□□□ 0.99
THBS1P07996 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
THBS1P07996 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
THBS1P07996 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
THBS1P07996 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.21■□□□□ 0.99
THBS1P07996 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
THBS1P07996 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THBS1P07996 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
THBS1P07996 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
THBS1P07996 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.21■□□□□ 0.99
THBS1P07996 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
THBS1P07996 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
THBS1P07996 BHLHE23-202ENST00000612929 1109 ntBASIC21.21■□□□□ 0.99
THBS1P07996 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.21■□□□□ 0.99
THBS1P07996 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
THBS1P07996 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
THBS1P07996 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
THBS1P07996 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
THBS1P07996 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.2■□□□□ 0.98
THBS1P07996 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
THBS1P07996 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.2■□□□□ 0.98
THBS1P07996 AL022069.1-201ENST00000568025 1636 ntBASIC21.2■□□□□ 0.98
THBS1P07996 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
THBS1P07996 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
THBS1P07996 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
THBS1P07996 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.2■□□□□ 0.98
THBS1P07996 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.2■□□□□ 0.98
THBS1P07996 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
THBS1P07996 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
THBS1P07996 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.2■□□□□ 0.98
THBS1P07996 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
THBS1P07996 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
THBS1P07996 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
THBS1P07996 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
THBS1P07996 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
THBS1P07996 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.19■□□□□ 0.98
THBS1P07996 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
THBS1P07996 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.19■□□□□ 0.98
THBS1P07996 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.19■□□□□ 0.98
THBS1P07996 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
THBS1P07996 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
THBS1P07996 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.18■□□□□ 0.98
THBS1P07996 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.18■□□□□ 0.98
THBS1P07996 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
THBS1P07996 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms