Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TSPAN9O75954 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.63■□□□□ 0.73
TSPAN9O75954 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TSPAN9O75954 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.63■□□□□ 0.73
TSPAN9O75954 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TSPAN9O75954 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN9O75954 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN9O75954 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN9O75954 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN9O75954 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN9O75954 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TSPAN9O75954 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN9O75954 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TSPAN9O75954 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.62■□□□□ 0.73
TSPAN9O75954 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TSPAN9O75954 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.62■□□□□ 0.73
TSPAN9O75954 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
TSPAN9O75954 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.62■□□□□ 0.73
TSPAN9O75954 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN9O75954 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TSPAN9O75954 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TSPAN9O75954 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.61■□□□□ 0.73
TSPAN9O75954 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TSPAN9O75954 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TSPAN9O75954 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TSPAN9O75954 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TSPAN9O75954 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN9O75954 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TSPAN9O75954 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN9O75954 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN9O75954 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TSPAN9O75954 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN9O75954 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN9O75954 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.6■□□□□ 0.73
TSPAN9O75954 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TSPAN9O75954 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TSPAN9O75954 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TSPAN9O75954 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.59■□□□□ 0.73
TSPAN9O75954 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TSPAN9O75954 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.59■□□□□ 0.73
TSPAN9O75954 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.59■□□□□ 0.73
TSPAN9O75954 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TSPAN9O75954 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.59■□□□□ 0.73
TSPAN9O75954 MIR3960-201ENST00000583311 91 ntBASIC19.59■□□□□ 0.73
TSPAN9O75954 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.59■□□□□ 0.73
TSPAN9O75954 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.59■□□□□ 0.73
TSPAN9O75954 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TSPAN9O75954 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TSPAN9O75954 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.58■□□□□ 0.73
TSPAN9O75954 AC093536.1-201ENST00000569153 554 ntBASIC19.58■□□□□ 0.72
TSPAN9O75954 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.58■□□□□ 0.72
TSPAN9O75954 C1orf229-201ENST00000623686 2258 ntBASIC19.58■□□□□ 0.72
TSPAN9O75954 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.57■□□□□ 0.72
TSPAN9O75954 RAP2CP1-202ENST00000605179 643 ntBASIC19.57■□□□□ 0.72
TSPAN9O75954 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TSPAN9O75954 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TSPAN9O75954 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.56■□□□□ 0.72
TSPAN9O75954 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TSPAN9O75954 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
TSPAN9O75954 DUX4L18-201ENST00000553347 1267 ntBASIC19.56■□□□□ 0.72
TSPAN9O75954 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN9O75954 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN9O75954 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN9O75954 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN9O75954 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TSPAN9O75954 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN9O75954 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TSPAN9O75954 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.55■□□□□ 0.72
TSPAN9O75954 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TSPAN9O75954 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN9O75954 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TSPAN9O75954 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TSPAN9O75954 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN9O75954 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN9O75954 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN9O75954 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.54■□□□□ 0.72
TSPAN9O75954 RARRES2P1-201ENST00000474487 481 ntBASIC19.54■□□□□ 0.72
TSPAN9O75954 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.54■□□□□ 0.72
TSPAN9O75954 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN9O75954 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.54■□□□□ 0.72
TSPAN9O75954 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN9O75954 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN9O75954 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN9O75954 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.53■□□□□ 0.72
TSPAN9O75954 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN9O75954 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN9O75954 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN9O75954 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN9O75954 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN9O75954 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms