Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1BO75841 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.21■□□□□ 0.83
UPK1BO75841 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPK1BO75841 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1BO75841 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1BO75841 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1BO75841 MIR6089-201ENST00000616698 64 ntBASIC20.2■□□□□ 0.82
UPK1BO75841 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.2■□□□□ 0.82
UPK1BO75841 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
UPK1BO75841 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1BO75841 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1BO75841 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1BO75841 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPK1BO75841 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UPK1BO75841 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1BO75841 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.19■□□□□ 0.82
UPK1BO75841 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1BO75841 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1BO75841 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UPK1BO75841 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.19■□□□□ 0.82
UPK1BO75841 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1BO75841 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1BO75841 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1BO75841 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UPK1BO75841 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1BO75841 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1BO75841 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1BO75841 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPK1BO75841 PKD1P6-201ENST00000343738 4769 ntBASIC20.18■□□□□ 0.82
UPK1BO75841 ANOS2P-203ENST00000472227 1816 ntBASIC20.18■□□□□ 0.82
UPK1BO75841 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UPK1BO75841 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK1BO75841 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK1BO75841 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.18■□□□□ 0.82
UPK1BO75841 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK1BO75841 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK1BO75841 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK1BO75841 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPK1BO75841 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.18■□□□□ 0.82
UPK1BO75841 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
UPK1BO75841 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UPK1BO75841 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPK1BO75841 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPK1BO75841 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.17■□□□□ 0.82
UPK1BO75841 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPK1BO75841 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.17■□□□□ 0.82
UPK1BO75841 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPK1BO75841 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UPK1BO75841 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.17■□□□□ 0.82
UPK1BO75841 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
UPK1BO75841 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPK1BO75841 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPK1BO75841 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPK1BO75841 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.16■□□□□ 0.82
UPK1BO75841 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPK1BO75841 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPK1BO75841 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.16■□□□□ 0.82
UPK1BO75841 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPK1BO75841 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPK1BO75841 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPK1BO75841 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPK1BO75841 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
UPK1BO75841 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPK1BO75841 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
UPK1BO75841 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.15■□□□□ 0.82
UPK1BO75841 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UPK1BO75841 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.15■□□□□ 0.82
UPK1BO75841 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPK1BO75841 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPK1BO75841 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPK1BO75841 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
UPK1BO75841 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
UPK1BO75841 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
UPK1BO75841 AC073130.3-201ENST00000624389 2278 ntBASIC20.14■□□□□ 0.81
UPK1BO75841 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.14■□□□□ 0.81
UPK1BO75841 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
UPK1BO75841 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
UPK1BO75841 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPK1BO75841 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPK1BO75841 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
UPK1BO75841 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1BO75841 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1BO75841 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1BO75841 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1BO75841 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1BO75841 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1BO75841 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1BO75841 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1BO75841 AP002365.1-201ENST00000603448 772 ntBASIC20.13■□□□□ 0.81
UPK1BO75841 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.13■□□□□ 0.81
UPK1BO75841 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.13■□□□□ 0.81
UPK1BO75841 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK1BO75841 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.12■□□□□ 0.81
UPK1BO75841 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.12■□□□□ 0.81
UPK1BO75841 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.12■□□□□ 0.81
UPK1BO75841 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1BO75841 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK1BO75841 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.12■□□□□ 0.81
UPK1BO75841 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.12■□□□□ 0.81
UPK1BO75841 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms