Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRIM3O75382 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
TRIM3O75382 AC137630.3-201ENST00000607245 391 ntBASIC21.41■■□□□ 1.02
TRIM3O75382 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM3O75382 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM3O75382 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM3O75382 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRIM3O75382 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIM3O75382 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM3O75382 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM3O75382 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM3O75382 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM3O75382 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM3O75382 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM3O75382 AC239859.2-201ENST00000444165 318 ntBASIC21.4■■□□□ 1.02
TRIM3O75382 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM3O75382 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM3O75382 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM3O75382 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM3O75382 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM3O75382 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM3O75382 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM3O75382 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM3O75382 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM3O75382 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM3O75382 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM3O75382 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM3O75382 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM3O75382 AC090877.2-201ENST00000558441 1738 ntBASIC21.38■■□□□ 1.01
TRIM3O75382 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM3O75382 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM3O75382 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.38■■□□□ 1.01
TRIM3O75382 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRIM3O75382 BX664725.1-201ENST00000438252 379 ntBASIC21.38■■□□□ 1.01
TRIM3O75382 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM3O75382 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM3O75382 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM3O75382 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM3O75382 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM3O75382 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM3O75382 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM3O75382 GUSBP5-201ENST00000418136 578 ntBASIC21.37■■□□□ 1.01
TRIM3O75382 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM3O75382 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM3O75382 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
TRIM3O75382 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM3O75382 SLC6A10P-202ENST00000431994 2058 ntBASIC21.36■■□□□ 1.01
TRIM3O75382 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM3O75382 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TRIM3O75382 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM3O75382 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM3O75382 AC022211.4-201ENST00000625094 2161 ntBASIC21.36■■□□□ 1.01
TRIM3O75382 AC079834.2-201ENST00000609776 1949 ntBASIC21.36■■□□□ 1.01
TRIM3O75382 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM3O75382 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRIM3O75382 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM3O75382 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM3O75382 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TRIM3O75382 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM3O75382 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM3O75382 KRT125P-201ENST00000546827 989 ntBASIC21.35■■□□□ 1.01
TRIM3O75382 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM3O75382 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM3O75382 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM3O75382 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM3O75382 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM3O75382 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM3O75382 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM3O75382 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM3O75382 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM3O75382 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.34■■□□□ 1.01
TRIM3O75382 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM3O75382 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRIM3O75382 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM3O75382 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRIM3O75382 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM3O75382 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
TRIM3O75382 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRIM3O75382 AC021242.3-201ENST00000607598 1377 ntBASIC21.34■■□□□ 1.01
TRIM3O75382 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM3O75382 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM3O75382 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TRIM3O75382 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM3O75382 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM3O75382 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.33■■□□□ 1.01
TRIM3O75382 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM3O75382 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM3O75382 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.32■■□□□ 1
TRIM3O75382 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TRIM3O75382 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM3O75382 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.32■■□□□ 1
TRIM3O75382 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.32■■□□□ 1
TRIM3O75382 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.32■■□□□ 1
TRIM3O75382 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.32■■□□□ 1
TRIM3O75382 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.32■■□□□ 1
TRIM3O75382 MIR4787-201ENST00000607364 84 ntBASIC21.32■■□□□ 1
TRIM3O75382 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM3O75382 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM3O75382 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM3O75382 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms