Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF253O75346 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF253O75346 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF253O75346 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF253O75346 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF253O75346 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF253O75346 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF253O75346 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF253O75346 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF253O75346 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF253O75346 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF253O75346 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF253O75346 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF253O75346 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF253O75346 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF253O75346 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ZNF253O75346 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF253O75346 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF253O75346 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF253O75346 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF253O75346 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF253O75346 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF253O75346 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF253O75346 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF253O75346 RP9P-202ENST00000450133 1212 ntBASIC17.84■□□□□ 0.45
ZNF253O75346 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF253O75346 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
ZNF253O75346 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF253O75346 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF253O75346 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF253O75346 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF253O75346 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF253O75346 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF253O75346 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF253O75346 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ZNF253O75346 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ZNF253O75346 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF253O75346 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF253O75346 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF253O75346 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ZNF253O75346 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF253O75346 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF253O75346 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ZNF253O75346 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ZNF253O75346 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.82■□□□□ 0.44
ZNF253O75346 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ZNF253O75346 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF253O75346 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF253O75346 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF253O75346 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF253O75346 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF253O75346 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ZNF253O75346 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF253O75346 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF253O75346 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF253O75346 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ZNF253O75346 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF253O75346 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF253O75346 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF253O75346 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF253O75346 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF253O75346 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF253O75346 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF253O75346 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF253O75346 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF253O75346 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF253O75346 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF253O75346 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF253O75346 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF253O75346 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF253O75346 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF253O75346 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ZNF253O75346 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF253O75346 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF253O75346 AL024507.2-201ENST00000606070 2574 ntBASIC17.8■□□□□ 0.44
ZNF253O75346 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF253O75346 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF253O75346 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF253O75346 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF253O75346 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF253O75346 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.79■□□□□ 0.44
ZNF253O75346 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF253O75346 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
ZNF253O75346 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF253O75346 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF253O75346 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF253O75346 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF253O75346 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ZNF253O75346 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF253O75346 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF253O75346 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ZNF253O75346 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
ZNF253O75346 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF253O75346 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF253O75346 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF253O75346 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF253O75346 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF253O75346 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF253O75346 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ZNF253O75346 MIR639-201ENST00000384974 98 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms