Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN1O60925 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN1O60925 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN1O60925 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN1O60925 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN1O60925 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN1O60925 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.78■□□□□ 0.92
PFDN1O60925 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN1O60925 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN1O60925 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PFDN1O60925 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN1O60925 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN1O60925 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PFDN1O60925 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PFDN1O60925 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PFDN1O60925 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.76■□□□□ 0.91
PFDN1O60925 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PFDN1O60925 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.76■□□□□ 0.91
PFDN1O60925 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PFDN1O60925 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PFDN1O60925 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PFDN1O60925 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PFDN1O60925 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN1O60925 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN1O60925 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN1O60925 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN1O60925 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN1O60925 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PFDN1O60925 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.75■□□□□ 0.91
PFDN1O60925 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PFDN1O60925 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN1O60925 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN1O60925 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN1O60925 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PFDN1O60925 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PFDN1O60925 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PFDN1O60925 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PFDN1O60925 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PFDN1O60925 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PFDN1O60925 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PFDN1O60925 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.74■□□□□ 0.91
PFDN1O60925 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PFDN1O60925 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PFDN1O60925 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PFDN1O60925 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PFDN1O60925 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.73■□□□□ 0.91
PFDN1O60925 GUSBP5-202ENST00000510805 1989 ntBASIC20.73■□□□□ 0.91
PFDN1O60925 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.73■□□□□ 0.91
PFDN1O60925 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PFDN1O60925 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PFDN1O60925 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PFDN1O60925 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PFDN1O60925 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.72■□□□□ 0.91
PFDN1O60925 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PFDN1O60925 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN1O60925 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN1O60925 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN1O60925 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN1O60925 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN1O60925 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.71■□□□□ 0.91
PFDN1O60925 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN1O60925 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PFDN1O60925 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PFDN1O60925 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.71■□□□□ 0.91
PFDN1O60925 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN1O60925 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PFDN1O60925 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PFDN1O60925 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN1O60925 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PFDN1O60925 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN1O60925 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN1O60925 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN1O60925 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN1O60925 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN1O60925 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PFDN1O60925 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PFDN1O60925 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.69■□□□□ 0.9
PFDN1O60925 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
PFDN1O60925 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
PFDN1O60925 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PFDN1O60925 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.68■□□□□ 0.9
PFDN1O60925 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.68■□□□□ 0.9
PFDN1O60925 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.68■□□□□ 0.9
PFDN1O60925 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PFDN1O60925 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN1O60925 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.68■□□□□ 0.9
PFDN1O60925 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN1O60925 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PFDN1O60925 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PFDN1O60925 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms