Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF1O43189 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF1O43189 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHF1O43189 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.79■□□□□ 0.76
PHF1O43189 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHF1O43189 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF1O43189 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHF1O43189 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.78■□□□□ 0.76
PHF1O43189 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF1O43189 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.78■□□□□ 0.76
PHF1O43189 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.78■□□□□ 0.76
PHF1O43189 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF1O43189 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF1O43189 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHF1O43189 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PHF1O43189 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.78■□□□□ 0.76
PHF1O43189 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.78■□□□□ 0.76
PHF1O43189 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.78■□□□□ 0.76
PHF1O43189 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF1O43189 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PHF1O43189 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF1O43189 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHF1O43189 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHF1O43189 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.77■□□□□ 0.76
PHF1O43189 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHF1O43189 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHF1O43189 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PHF1O43189 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHF1O43189 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.77■□□□□ 0.76
PHF1O43189 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.77■□□□□ 0.76
PHF1O43189 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.77■□□□□ 0.76
PHF1O43189 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.77■□□□□ 0.76
PHF1O43189 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.77■□□□□ 0.76
PHF1O43189 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PHF1O43189 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PHF1O43189 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PHF1O43189 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF1O43189 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PHF1O43189 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PHF1O43189 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF1O43189 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.76■□□□□ 0.75
PHF1O43189 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.76■□□□□ 0.75
PHF1O43189 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF1O43189 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF1O43189 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF1O43189 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PHF1O43189 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF1O43189 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF1O43189 KRT16P3-201ENST00000439127 1283 ntBASIC19.76■□□□□ 0.75
PHF1O43189 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.76■□□□□ 0.75
PHF1O43189 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PHF1O43189 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.76■□□□□ 0.75
PHF1O43189 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PHF1O43189 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PHF1O43189 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF1O43189 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF1O43189 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF1O43189 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF1O43189 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PHF1O43189 MIR4787-201ENST00000607364 84 ntBASIC19.75■□□□□ 0.75
PHF1O43189 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF1O43189 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF1O43189 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PHF1O43189 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PHF1O43189 LINC01124-201ENST00000409786 2117 ntBASIC19.75■□□□□ 0.75
PHF1O43189 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF1O43189 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PHF1O43189 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.74■□□□□ 0.75
PHF1O43189 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PHF1O43189 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.74■□□□□ 0.75
PHF1O43189 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.74■□□□□ 0.75
PHF1O43189 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF1O43189 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PHF1O43189 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PHF1O43189 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.73■□□□□ 0.75
PHF1O43189 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF1O43189 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF1O43189 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF1O43189 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF1O43189 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHF1O43189 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PHF1O43189 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PHF1O43189 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.73■□□□□ 0.75
PHF1O43189 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.73■□□□□ 0.75
PHF1O43189 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF1O43189 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PHF1O43189 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHF1O43189 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.72■□□□□ 0.75
PHF1O43189 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.72■□□□□ 0.75
PHF1O43189 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF1O43189 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PHF1O43189 BX664725.1-201ENST00000438252 379 ntBASIC19.72■□□□□ 0.75
PHF1O43189 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.72■□□□□ 0.75
PHF1O43189 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.72■□□□□ 0.75
PHF1O43189 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PHF1O43189 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PHF1O43189 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF1O43189 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF1O43189 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF1O43189 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms