Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL21O00585 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL21O00585 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.55■□□□□ 0.88
CCL21O00585 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.55■□□□□ 0.88
CCL21O00585 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL21O00585 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCL21O00585 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCL21O00585 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCL21O00585 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCL21O00585 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCL21O00585 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCL21O00585 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCL21O00585 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.54■□□□□ 0.88
CCL21O00585 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCL21O00585 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.54■□□□□ 0.88
CCL21O00585 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCL21O00585 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCL21O00585 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.53■□□□□ 0.88
CCL21O00585 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.53■□□□□ 0.88
CCL21O00585 MIR6821-201ENST00000617625 74 ntBASIC20.53■□□□□ 0.88
CCL21O00585 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.52■□□□□ 0.88
CCL21O00585 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL21O00585 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL21O00585 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL21O00585 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.52■□□□□ 0.88
CCL21O00585 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.52■□□□□ 0.88
CCL21O00585 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CCL21O00585 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCL21O00585 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCL21O00585 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.51■□□□□ 0.87
CCL21O00585 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.51■□□□□ 0.87
CCL21O00585 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCL21O00585 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.51■□□□□ 0.87
CCL21O00585 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.51■□□□□ 0.87
CCL21O00585 CA15P2-201ENST00000611168 834 ntBASIC20.51■□□□□ 0.87
CCL21O00585 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCL21O00585 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCL21O00585 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL21O00585 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL21O00585 RASA4CP-201ENST00000424092 1398 ntBASIC20.5■□□□□ 0.87
CCL21O00585 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.5■□□□□ 0.87
CCL21O00585 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CCL21O00585 SERBP1P1-201ENST00000396021 1160 ntBASIC20.5■□□□□ 0.87
CCL21O00585 AC097381.1-201ENST00000429019 1296 ntBASIC20.5■□□□□ 0.87
CCL21O00585 AC099791.2-201ENST00000605725 427 ntBASIC20.5■□□□□ 0.87
CCL21O00585 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL21O00585 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL21O00585 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCL21O00585 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCL21O00585 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCL21O00585 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CCL21O00585 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCL21O00585 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCL21O00585 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCL21O00585 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCL21O00585 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.48■□□□□ 0.87
CCL21O00585 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCL21O00585 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CCL21O00585 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCL21O00585 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.48■□□□□ 0.87
CCL21O00585 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.48■□□□□ 0.87
CCL21O00585 AC027682.1-201ENST00000562846 899 ntBASIC20.48■□□□□ 0.87
CCL21O00585 AC008764.7-201ENST00000593779 1081 ntBASIC20.48■□□□□ 0.87
CCL21O00585 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCL21O00585 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
CCL21O00585 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCL21O00585 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCL21O00585 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL21O00585 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL21O00585 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CCL21O00585 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCL21O00585 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL21O00585 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL21O00585 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCL21O00585 AC087623.3-201ENST00000607047 1098 ntBASIC20.47■□□□□ 0.87
CCL21O00585 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.46■□□□□ 0.87
CCL21O00585 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCL21O00585 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.46■□□□□ 0.87
CCL21O00585 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.46■□□□□ 0.87
CCL21O00585 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.46■□□□□ 0.87
CCL21O00585 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCL21O00585 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCL21O00585 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.45■□□□□ 0.86
CCL21O00585 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CCL21O00585 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCL21O00585 AC010501.1-201ENST00000606270 1962 ntBASIC20.45■□□□□ 0.86
CCL21O00585 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.45■□□□□ 0.86
CCL21O00585 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.45■□□□□ 0.86
CCL21O00585 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.45■□□□□ 0.86
CCL21O00585 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms