Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDUFA4O00483 MIR4281-201ENST00000580852 62 ntBASIC17.74■□□□□ 0.43
NDUFA4O00483 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.74■□□□□ 0.43
NDUFA4O00483 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDUFA4O00483 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NDUFA4O00483 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDUFA4O00483 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDUFA4O00483 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA4O00483 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.73■□□□□ 0.43
NDUFA4O00483 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NDUFA4O00483 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA4O00483 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA4O00483 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.73■□□□□ 0.43
NDUFA4O00483 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA4O00483 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA4O00483 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFA4O00483 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA4O00483 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA4O00483 AL022069.1-201ENST00000568025 1636 ntBASIC17.72■□□□□ 0.43
NDUFA4O00483 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NDUFA4O00483 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
NDUFA4O00483 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA4O00483 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA4O00483 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA4O00483 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFA4O00483 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.72■□□□□ 0.43
NDUFA4O00483 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.72■□□□□ 0.43
NDUFA4O00483 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.72■□□□□ 0.43
NDUFA4O00483 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NDUFA4O00483 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFA4O00483 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFA4O00483 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.71■□□□□ 0.43
NDUFA4O00483 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFA4O00483 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFA4O00483 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFA4O00483 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.71■□□□□ 0.43
NDUFA4O00483 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.71■□□□□ 0.43
NDUFA4O00483 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.71■□□□□ 0.43
NDUFA4O00483 AC103724.3-201ENST00000564481 992 ntBASIC17.71■□□□□ 0.43
NDUFA4O00483 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFA4O00483 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
NDUFA4O00483 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.71■□□□□ 0.42
NDUFA4O00483 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA4O00483 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA4O00483 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA4O00483 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA4O00483 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFA4O00483 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA4O00483 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.69■□□□□ 0.42
NDUFA4O00483 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA4O00483 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.69■□□□□ 0.42
NDUFA4O00483 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA4O00483 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA4O00483 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.69■□□□□ 0.42
NDUFA4O00483 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.69■□□□□ 0.42
NDUFA4O00483 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA4O00483 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA4O00483 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.69■□□□□ 0.42
NDUFA4O00483 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.69■□□□□ 0.42
NDUFA4O00483 AL031848.2-201ENST00000607670 837 ntBASIC17.69■□□□□ 0.42
NDUFA4O00483 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NDUFA4O00483 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA4O00483 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA4O00483 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFA4O00483 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NDUFA4O00483 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NDUFA4O00483 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA4O00483 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NDUFA4O00483 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA4O00483 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA4O00483 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFA4O00483 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
NDUFA4O00483 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA4O00483 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA4O00483 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NDUFA4O00483 AC004812.2-201ENST00000611079 2094 ntBASIC17.67■□□□□ 0.42
NDUFA4O00483 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.67■□□□□ 0.42
NDUFA4O00483 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.67■□□□□ 0.42
NDUFA4O00483 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA4O00483 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.67■□□□□ 0.42
NDUFA4O00483 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFA4O00483 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NDUFA4O00483 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA4O00483 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.66■□□□□ 0.42
NDUFA4O00483 AF131216.4-201ENST00000638924 1588 ntBASIC17.66■□□□□ 0.42
NDUFA4O00483 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA4O00483 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA4O00483 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA4O00483 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFA4O00483 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFA4O00483 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFA4O00483 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA4O00483 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA4O00483 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA4O00483 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.65■□□□□ 0.42
NDUFA4O00483 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA4O00483 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
NDUFA4O00483 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.65■□□□□ 0.42
NDUFA4O00483 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFA4O00483 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms