Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTCAO00442 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTCAO00442 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTCAO00442 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTCAO00442 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTCAO00442 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTCAO00442 RARRES2P1-201ENST00000474487 481 ntBASIC22.03■■□□□ 1.12
RTCAO00442 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.03■■□□□ 1.12
RTCAO00442 AC141586.4-201ENST00000624558 1573 ntBASIC22.03■■□□□ 1.12
RTCAO00442 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTCAO00442 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTCAO00442 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTCAO00442 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTCAO00442 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
RTCAO00442 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCAO00442 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCAO00442 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCAO00442 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.01■■□□□ 1.11
RTCAO00442 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.01■■□□□ 1.11
RTCAO00442 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCAO00442 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.01■■□□□ 1.11
RTCAO00442 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCAO00442 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTCAO00442 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCAO00442 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCAO00442 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTCAO00442 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTCAO00442 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTCAO00442 AL031848.2-201ENST00000607670 837 ntBASIC22■■□□□ 1.11
RTCAO00442 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTCAO00442 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RTCAO00442 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22■■□□□ 1.11
RTCAO00442 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22■■□□□ 1.11
RTCAO00442 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RTCAO00442 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTCAO00442 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTCAO00442 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RTCAO00442 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.99■■□□□ 1.11
RTCAO00442 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.99■■□□□ 1.11
RTCAO00442 ABCB10P4-201ENST00000566803 2184 ntBASIC21.99■■□□□ 1.11
RTCAO00442 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTCAO00442 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCAO00442 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCAO00442 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCAO00442 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCAO00442 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.98■■□□□ 1.11
RTCAO00442 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RTCAO00442 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTCAO00442 AF131216.4-201ENST00000638924 1588 ntBASIC21.98■■□□□ 1.11
RTCAO00442 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCAO00442 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTCAO00442 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCAO00442 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCAO00442 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.97■■□□□ 1.11
RTCAO00442 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.97■■□□□ 1.11
RTCAO00442 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.97■■□□□ 1.11
RTCAO00442 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTCAO00442 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTCAO00442 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.96■■□□□ 1.11
RTCAO00442 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RTCAO00442 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.96■■□□□ 1.11
RTCAO00442 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.96■■□□□ 1.11
RTCAO00442 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
RTCAO00442 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
RTCAO00442 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCAO00442 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.95■■□□□ 1.1
RTCAO00442 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.95■■□□□ 1.1
RTCAO00442 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.95■■□□□ 1.1
RTCAO00442 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RTCAO00442 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCAO00442 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCAO00442 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.95■■□□□ 1.1
RTCAO00442 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCAO00442 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCAO00442 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.94■■□□□ 1.1
RTCAO00442 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTCAO00442 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTCAO00442 AC131274.2-201ENST00000580697 1507 ntBASIC21.94■■□□□ 1.1
RTCAO00442 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTCAO00442 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTCAO00442 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTCAO00442 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTCAO00442 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.94■■□□□ 1.1
RTCAO00442 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RTCAO00442 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTCAO00442 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTCAO00442 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTCAO00442 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RTCAO00442 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.93■■□□□ 1.1
RTCAO00442 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
RTCAO00442 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTCAO00442 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.93■■□□□ 1.1
RTCAO00442 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTCAO00442 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTCAO00442 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.92■■□□□ 1.1
RTCAO00442 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RTCAO00442 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTCAO00442 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTCAO00442 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.92■■□□□ 1.1
RTCAO00442 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms