Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.03■■□□□ 1.28
H3BM21 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
H3BM21 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
H3BM21 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.02■■□□□ 1.28
H3BM21 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
H3BM21 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
H3BM21 AC131281.2-201ENST00000520478 145 ntBASIC23.02■■□□□ 1.28
H3BM21 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
H3BM21 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
H3BM21 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.01■■□□□ 1.27
H3BM21 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.01■■□□□ 1.27
H3BM21 MIR3621-201ENST00000580529 85 ntBASIC23.01■■□□□ 1.27
H3BM21 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
H3BM21 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
H3BM21 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.01■■□□□ 1.27
H3BM21 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
H3BM21 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23■■□□□ 1.27
H3BM21 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
H3BM21 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23■■□□□ 1.27
H3BM21 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
H3BM21 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
H3BM21 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23■■□□□ 1.27
H3BM21 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23■■□□□ 1.27
H3BM21 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23■■□□□ 1.27
H3BM21 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
H3BM21 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23■■□□□ 1.27
H3BM21 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23■■□□□ 1.27
H3BM21 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23■■□□□ 1.27
H3BM21 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
H3BM21 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
H3BM21 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
H3BM21 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
H3BM21 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.99■■□□□ 1.27
H3BM21 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.99■■□□□ 1.27
H3BM21 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
H3BM21 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
H3BM21 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
H3BM21 AC142381.3-201ENST00000568208 1670 ntBASIC22.98■■□□□ 1.27
H3BM21 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.98■■□□□ 1.27
H3BM21 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
H3BM21 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
H3BM21 AL136116.3-201ENST00000402907 1138 ntBASIC22.98■■□□□ 1.27
H3BM21 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
H3BM21 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
H3BM21 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
H3BM21 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
H3BM21 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
H3BM21 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
H3BM21 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
H3BM21 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
H3BM21 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
H3BM21 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.96■■□□□ 1.27
H3BM21 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.96■■□□□ 1.27
H3BM21 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.96■■□□□ 1.27
H3BM21 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
H3BM21 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.96■■□□□ 1.27
H3BM21 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
H3BM21 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
H3BM21 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
H3BM21 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
H3BM21 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
H3BM21 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
H3BM21 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.95■■□□□ 1.26
H3BM21 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
H3BM21 MIR6089-201ENST00000616698 64 ntBASIC22.95■■□□□ 1.26
H3BM21 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.95■■□□□ 1.26
H3BM21 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
H3BM21 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
H3BM21 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.94■■□□□ 1.26
H3BM21 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
H3BM21 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.94■■□□□ 1.26
H3BM21 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
H3BM21 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.94■■□□□ 1.26
H3BM21 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.93■■□□□ 1.26
H3BM21 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
H3BM21 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.93■■□□□ 1.26
H3BM21 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.93■■□□□ 1.26
H3BM21 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.93■■□□□ 1.26
H3BM21 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
H3BM21 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
H3BM21 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
H3BM21 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.93■■□□□ 1.26
H3BM21 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.93■■□□□ 1.26
H3BM21 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
H3BM21 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
H3BM21 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
H3BM21 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
H3BM21 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
H3BM21 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.92■■□□□ 1.26
H3BM21 AL139246.5-201ENST00000606645 996 ntBASIC22.92■■□□□ 1.26
H3BM21 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.92■■□□□ 1.26
H3BM21 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.92■■□□□ 1.26
H3BM21 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.92■■□□□ 1.26
H3BM21 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.92■■□□□ 1.26
H3BM21 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
H3BM21 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
H3BM21 AC138932.3-201ENST00000567634 1902 ntBASIC22.91■■□□□ 1.26
H3BM21 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
H3BM21 SNX5-217ENST00000606557 1087 ntBASIC22.91■■□□□ 1.26
H3BM21 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms