Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NPIPB4C9JG80 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.55■□□□□ 0.88
NPIPB4C9JG80 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.55■□□□□ 0.88
NPIPB4C9JG80 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.55■□□□□ 0.88
NPIPB4C9JG80 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.55■□□□□ 0.88
NPIPB4C9JG80 MIR4508-201ENST00000584178 70 ntBASIC20.55■□□□□ 0.88
NPIPB4C9JG80 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.55■□□□□ 0.88
NPIPB4C9JG80 AL022069.1-201ENST00000568025 1636 ntBASIC20.55■□□□□ 0.88
NPIPB4C9JG80 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPIPB4C9JG80 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPB4C9JG80 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NPIPB4C9JG80 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.54■□□□□ 0.88
NPIPB4C9JG80 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.54■□□□□ 0.88
NPIPB4C9JG80 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPB4C9JG80 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.54■□□□□ 0.88
NPIPB4C9JG80 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.54■□□□□ 0.88
NPIPB4C9JG80 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPB4C9JG80 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPB4C9JG80 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.54■□□□□ 0.88
NPIPB4C9JG80 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.53■□□□□ 0.88
NPIPB4C9JG80 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.53■□□□□ 0.88
NPIPB4C9JG80 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.53■□□□□ 0.88
NPIPB4C9JG80 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.53■□□□□ 0.88
NPIPB4C9JG80 AC010980.1-201ENST00000587192 1142 ntBASIC20.53■□□□□ 0.88
NPIPB4C9JG80 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.53■□□□□ 0.88
NPIPB4C9JG80 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPB4C9JG80 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPB4C9JG80 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPIPB4C9JG80 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.52■□□□□ 0.88
NPIPB4C9JG80 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.52■□□□□ 0.88
NPIPB4C9JG80 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB4C9JG80 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB4C9JG80 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB4C9JG80 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.51■□□□□ 0.87
NPIPB4C9JG80 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.51■□□□□ 0.87
NPIPB4C9JG80 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.51■□□□□ 0.87
NPIPB4C9JG80 THA1P-201ENST00000590384 1145 ntBASIC20.51■□□□□ 0.87
NPIPB4C9JG80 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.51■□□□□ 0.87
NPIPB4C9JG80 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB4C9JG80 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPB4C9JG80 ABCB10P4-201ENST00000566803 2184 ntBASIC20.51■□□□□ 0.87
NPIPB4C9JG80 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NPIPB4C9JG80 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
NPIPB4C9JG80 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPIPB4C9JG80 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.5■□□□□ 0.87
NPIPB4C9JG80 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.5■□□□□ 0.87
NPIPB4C9JG80 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPIPB4C9JG80 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.5■□□□□ 0.87
NPIPB4C9JG80 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.5■□□□□ 0.87
NPIPB4C9JG80 MIR4281-201ENST00000580852 62 ntBASIC20.5■□□□□ 0.87
NPIPB4C9JG80 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.5■□□□□ 0.87
NPIPB4C9JG80 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPIPB4C9JG80 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.5■□□□□ 0.87
NPIPB4C9JG80 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 AC131274.2-201ENST00000580697 1507 ntBASIC20.49■□□□□ 0.87
NPIPB4C9JG80 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPB4C9JG80 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 AL033527.3-201ENST00000566366 1196 ntBASIC20.48■□□□□ 0.87
NPIPB4C9JG80 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPB4C9JG80 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPB4C9JG80 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.47■□□□□ 0.87
NPIPB4C9JG80 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPB4C9JG80 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPB4C9JG80 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPB4C9JG80 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.47■□□□□ 0.87
NPIPB4C9JG80 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPB4C9JG80 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPB4C9JG80 AF131216.4-201ENST00000638924 1588 ntBASIC20.46■□□□□ 0.87
NPIPB4C9JG80 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPIPB4C9JG80 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPIPB4C9JG80 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPIPB4C9JG80 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.46■□□□□ 0.87
NPIPB4C9JG80 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPIPB4C9JG80 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.46■□□□□ 0.87
NPIPB4C9JG80 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.45■□□□□ 0.86
NPIPB4C9JG80 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NPIPB4C9JG80 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.45■□□□□ 0.86
NPIPB4C9JG80 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms