Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC00473A8K010 HSD17B1P1-201ENST00000590052 955 ntBASIC18.82■□□□□ 0.6
LINC00473A8K010 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00473A8K010 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00473A8K010 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00473A8K010 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00473A8K010 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00473A8K010 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC00473A8K010 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LINC00473A8K010 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00473A8K010 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00473A8K010 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00473A8K010 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00473A8K010 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00473A8K010 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC00473A8K010 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LINC00473A8K010 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LINC00473A8K010 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.81■□□□□ 0.6
LINC00473A8K010 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.81■□□□□ 0.6
LINC00473A8K010 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00473A8K010 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.81■□□□□ 0.6
LINC00473A8K010 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00473A8K010 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.81■□□□□ 0.6
LINC00473A8K010 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LINC00473A8K010 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00473A8K010 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
LINC00473A8K010 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC00473A8K010 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00473A8K010 AL592295.1-201ENST00000400984 884 ntBASIC18.8■□□□□ 0.6
LINC00473A8K010 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00473A8K010 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00473A8K010 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00473A8K010 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00473A8K010 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00473A8K010 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LINC00473A8K010 AC068473.5-201ENST00000616428 2072 ntBASIC18.79■□□□□ 0.6
LINC00473A8K010 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC00473A8K010 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.79■□□□□ 0.6
LINC00473A8K010 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00473A8K010 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00473A8K010 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00473A8K010 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC00473A8K010 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00473A8K010 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00473A8K010 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00473A8K010 AC129492.7-201ENST00000622992 756 ntBASIC18.78■□□□□ 0.6
LINC00473A8K010 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00473A8K010 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.78■□□□□ 0.6
LINC00473A8K010 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00473A8K010 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.77■□□□□ 0.6
LINC00473A8K010 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00473A8K010 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00473A8K010 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.77■□□□□ 0.6
LINC00473A8K010 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00473A8K010 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LINC00473A8K010 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LINC00473A8K010 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00473A8K010 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00473A8K010 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00473A8K010 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LINC00473A8K010 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00473A8K010 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00473A8K010 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00473A8K010 KRT18P60-201ENST00000312876 1297 ntBASIC18.76■□□□□ 0.59
LINC00473A8K010 LONRF2P2-201ENST00000439212 571 ntBASIC18.76■□□□□ 0.59
LINC00473A8K010 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00473A8K010 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LINC00473A8K010 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LINC00473A8K010 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.76■□□□□ 0.59
LINC00473A8K010 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00473A8K010 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00473A8K010 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC00473A8K010 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00473A8K010 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00473A8K010 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.75■□□□□ 0.59
LINC00473A8K010 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC00473A8K010 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00473A8K010 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00473A8K010 AC012676.1-201ENST00000574705 1949 ntBASIC18.74■□□□□ 0.59
LINC00473A8K010 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00473A8K010 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.74■□□□□ 0.59
LINC00473A8K010 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00473A8K010 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00473A8K010 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00473A8K010 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00473A8K010 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00473A8K010 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00473A8K010 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00473A8K010 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00473A8K010 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LINC00473A8K010 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LINC00473A8K010 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00473A8K010 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00473A8K010 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00473A8K010 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00473A8K010 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LINC00473A8K010 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00473A8K010 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC00473A8K010 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00473A8K010 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms