Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01548A6NM66 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01548A6NM66 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01548A6NM66 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC01548A6NM66 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.28■□□□□ 0.52
LINC01548A6NM66 AC092028.1-203ENST00000608262 953 ntBASIC18.28■□□□□ 0.52
LINC01548A6NM66 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
LINC01548A6NM66 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01548A6NM66 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.27■□□□□ 0.52
LINC01548A6NM66 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01548A6NM66 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.27■□□□□ 0.52
LINC01548A6NM66 TSPY9P-201ENST00000440215 945 ntBASIC18.27■□□□□ 0.52
LINC01548A6NM66 TSPY11P-201ENST00000442607 1045 ntBASIC18.27■□□□□ 0.52
LINC01548A6NM66 UNC93B8-201ENST00000511903 705 ntBASIC18.27■□□□□ 0.52
LINC01548A6NM66 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01548A6NM66 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LINC01548A6NM66 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINC01548A6NM66 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01548A6NM66 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01548A6NM66 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01548A6NM66 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01548A6NM66 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LINC01548A6NM66 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01548A6NM66 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
LINC01548A6NM66 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01548A6NM66 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01548A6NM66 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01548A6NM66 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01548A6NM66 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LINC01548A6NM66 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01548A6NM66 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.25■□□□□ 0.51
LINC01548A6NM66 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01548A6NM66 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01548A6NM66 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.25■□□□□ 0.51
LINC01548A6NM66 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01548A6NM66 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01548A6NM66 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LINC01548A6NM66 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01548A6NM66 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01548A6NM66 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01548A6NM66 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01548A6NM66 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01548A6NM66 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01548A6NM66 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01548A6NM66 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
LINC01548A6NM66 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LINC01548A6NM66 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.24■□□□□ 0.51
LINC01548A6NM66 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01548A6NM66 AC131274.2-201ENST00000580697 1507 ntBASIC18.23■□□□□ 0.51
LINC01548A6NM66 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01548A6NM66 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01548A6NM66 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LINC01548A6NM66 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01548A6NM66 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01548A6NM66 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01548A6NM66 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01548A6NM66 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01548A6NM66 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.23■□□□□ 0.51
LINC01548A6NM66 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC01548A6NM66 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01548A6NM66 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC01548A6NM66 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01548A6NM66 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01548A6NM66 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01548A6NM66 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01548A6NM66 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
LINC01548A6NM66 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01548A6NM66 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.22■□□□□ 0.51
LINC01548A6NM66 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC01548A6NM66 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC01548A6NM66 AL139125.2-201ENST00000623134 1869 ntBASIC18.22■□□□□ 0.51
LINC01548A6NM66 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LINC01548A6NM66 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.22■□□□□ 0.51
LINC01548A6NM66 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC01548A6NM66 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01548A6NM66 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01548A6NM66 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01548A6NM66 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC01548A6NM66 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01548A6NM66 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01548A6NM66 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC01548A6NM66 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LINC01548A6NM66 SNX5-217ENST00000606557 1087 ntBASIC18.21■□□□□ 0.51
LINC01548A6NM66 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LINC01548A6NM66 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.21■□□□□ 0.51
LINC01548A6NM66 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01548A6NM66 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01548A6NM66 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC01548A6NM66 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LINC01548A6NM66 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
LINC01548A6NM66 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
LINC01548A6NM66 AL356441.2-201ENST00000443009 864 ntBASIC18.2■□□□□ 0.5
LINC01548A6NM66 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.2■□□□□ 0.5
LINC01548A6NM66 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC01548A6NM66 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC01548A6NM66 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01548A6NM66 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01548A6NM66 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01548A6NM66 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LINC01548A6NM66 LINC01124-201ENST00000409786 2117 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms