Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM235A6NFC5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM235A6NFC5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM235A6NFC5 FOXO3B-201ENST00000395675 1928 ntBASIC19.67■□□□□ 0.74
TMEM235A6NFC5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TMEM235A6NFC5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM235A6NFC5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
TMEM235A6NFC5 AL117328.2-201ENST00000624617 1940 ntBASIC19.66■□□□□ 0.74
TMEM235A6NFC5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM235A6NFC5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TMEM235A6NFC5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM235A6NFC5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM235A6NFC5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM235A6NFC5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM235A6NFC5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM235A6NFC5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TMEM235A6NFC5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM235A6NFC5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
TMEM235A6NFC5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM235A6NFC5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM235A6NFC5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM235A6NFC5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM235A6NFC5 AC016575.1-201ENST00000607026 382 ntBASIC19.64■□□□□ 0.73
TMEM235A6NFC5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM235A6NFC5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM235A6NFC5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM235A6NFC5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 AC233723.2-201ENST00000623798 2106 ntBASIC19.61■□□□□ 0.73
TMEM235A6NFC5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TMEM235A6NFC5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM235A6NFC5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM235A6NFC5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM235A6NFC5 RP9P-202ENST00000450133 1212 ntBASIC19.6■□□□□ 0.73
TMEM235A6NFC5 AC092296.2-201ENST00000589470 999 ntBASIC19.6■□□□□ 0.73
TMEM235A6NFC5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM235A6NFC5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM235A6NFC5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM235A6NFC5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM235A6NFC5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM235A6NFC5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM235A6NFC5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
TMEM235A6NFC5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM235A6NFC5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM235A6NFC5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM235A6NFC5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM235A6NFC5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM235A6NFC5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TMEM235A6NFC5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM235A6NFC5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM235A6NFC5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM235A6NFC5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM235A6NFC5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms