Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MEIS3P1A6NDR6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MEIS3P1A6NDR6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.71■□□□□ 0.75
MEIS3P1A6NDR6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MEIS3P1A6NDR6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MEIS3P1A6NDR6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.71■□□□□ 0.75
MEIS3P1A6NDR6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MEIS3P1A6NDR6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MEIS3P1A6NDR6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MEIS3P1A6NDR6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MEIS3P1A6NDR6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.71■□□□□ 0.75
MEIS3P1A6NDR6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
MEIS3P1A6NDR6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.7■□□□□ 0.74
MEIS3P1A6NDR6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MEIS3P1A6NDR6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MEIS3P1A6NDR6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MEIS3P1A6NDR6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MEIS3P1A6NDR6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MEIS3P1A6NDR6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MEIS3P1A6NDR6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MEIS3P1A6NDR6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MEIS3P1A6NDR6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MEIS3P1A6NDR6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
MEIS3P1A6NDR6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.69■□□□□ 0.74
MEIS3P1A6NDR6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.69■□□□□ 0.74
MEIS3P1A6NDR6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MEIS3P1A6NDR6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MEIS3P1A6NDR6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MEIS3P1A6NDR6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 LINC00565-201ENST00000562710 2331 ntBASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MEIS3P1A6NDR6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MEIS3P1A6NDR6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 PKD1P6-201ENST00000343738 4769 ntBASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MEIS3P1A6NDR6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MEIS3P1A6NDR6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MEIS3P1A6NDR6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MEIS3P1A6NDR6 RPS2P35-201ENST00000443417 897 ntBASIC19.64■□□□□ 0.73
MEIS3P1A6NDR6 AL157400.5-201ENST00000507624 621 ntBASIC19.64■□□□□ 0.73
MEIS3P1A6NDR6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.64■□□□□ 0.73
MEIS3P1A6NDR6 CR559946.2-201ENST00000623684 991 ntBASIC19.64■□□□□ 0.73
MEIS3P1A6NDR6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MEIS3P1A6NDR6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.64■□□□□ 0.73
MEIS3P1A6NDR6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MEIS3P1A6NDR6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms