Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RNF103-CHMP3A0A140T963 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF103-CHMP3A0A140T963 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF103-CHMP3A0A140T963 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF103-CHMP3A0A140T963 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF103-CHMP3A0A140T963 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF103-CHMP3A0A140T963 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF103-CHMP3A0A140T963 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF103-CHMP3A0A140T963 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF103-CHMP3A0A140T963 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RNF103-CHMP3A0A140T963 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.08■■□□□ 1.13
RNF103-CHMP3A0A140T963 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF103-CHMP3A0A140T963 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF103-CHMP3A0A140T963 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF103-CHMP3A0A140T963 PKD1P6-201ENST00000343738 4769 ntBASIC22.08■■□□□ 1.13
RNF103-CHMP3A0A140T963 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF103-CHMP3A0A140T963 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.08■■□□□ 1.13
RNF103-CHMP3A0A140T963 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF103-CHMP3A0A140T963 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.08■■□□□ 1.12
RNF103-CHMP3A0A140T963 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF103-CHMP3A0A140T963 CLDN5-201ENST00000403084 2357 ntBASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF103-CHMP3A0A140T963 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.06■■□□□ 1.12
RNF103-CHMP3A0A140T963 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 FOXO3B-201ENST00000395675 1928 ntBASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF103-CHMP3A0A140T963 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF103-CHMP3A0A140T963 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF103-CHMP3A0A140T963 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF103-CHMP3A0A140T963 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RNF103-CHMP3A0A140T963 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF103-CHMP3A0A140T963 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF103-CHMP3A0A140T963 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF103-CHMP3A0A140T963 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF103-CHMP3A0A140T963 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF103-CHMP3A0A140T963 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF103-CHMP3A0A140T963 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF103-CHMP3A0A140T963 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF103-CHMP3A0A140T963 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.03■■□□□ 1.12
RNF103-CHMP3A0A140T963 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
RNF103-CHMP3A0A140T963 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RNF103-CHMP3A0A140T963 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF103-CHMP3A0A140T963 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF103-CHMP3A0A140T963 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RNF103-CHMP3A0A140T963 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RNF103-CHMP3A0A140T963 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF103-CHMP3A0A140T963 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF103-CHMP3A0A140T963 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF103-CHMP3A0A140T963 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF103-CHMP3A0A140T963 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF103-CHMP3A0A140T963 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF103-CHMP3A0A140T963 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF103-CHMP3A0A140T963 AC004812.2-201ENST00000611079 2094 ntBASIC22.02■■□□□ 1.11
RNF103-CHMP3A0A140T963 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
RNF103-CHMP3A0A140T963 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RNF103-CHMP3A0A140T963 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RNF103-CHMP3A0A140T963 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF103-CHMP3A0A140T963 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
RNF103-CHMP3A0A140T963 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF103-CHMP3A0A140T963 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF103-CHMP3A0A140T963 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RNF103-CHMP3A0A140T963 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RNF103-CHMP3A0A140T963 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RNF103-CHMP3A0A140T963 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF103-CHMP3A0A140T963 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF103-CHMP3A0A140T963 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms