Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRGV8A0A0C4DH27 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRGV8A0A0C4DH27 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TRGV8A0A0C4DH27 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.68■□□□□ 0.9
TRGV8A0A0C4DH27 SYT6-210ENST00000641643 1587 ntBASIC20.68■□□□□ 0.9
TRGV8A0A0C4DH27 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV8A0A0C4DH27 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV8A0A0C4DH27 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV8A0A0C4DH27 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV8A0A0C4DH27 AL136967.2-201ENST00000623968 743 ntBASIC20.67■□□□□ 0.9
TRGV8A0A0C4DH27 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV8A0A0C4DH27 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV8A0A0C4DH27 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV8A0A0C4DH27 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 AC092171.4-201ENST00000609130 632 ntBASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 AL121749.1-202ENST00000609313 2153 ntBASIC20.66■□□□□ 0.9
TRGV8A0A0C4DH27 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV8A0A0C4DH27 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV8A0A0C4DH27 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.65■□□□□ 0.9
TRGV8A0A0C4DH27 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.65■□□□□ 0.9
TRGV8A0A0C4DH27 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.65■□□□□ 0.9
TRGV8A0A0C4DH27 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
TRGV8A0A0C4DH27 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.65■□□□□ 0.9
TRGV8A0A0C4DH27 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV8A0A0C4DH27 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.64■□□□□ 0.89
TRGV8A0A0C4DH27 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.64■□□□□ 0.89
TRGV8A0A0C4DH27 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRGV8A0A0C4DH27 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRGV8A0A0C4DH27 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 MIR939-201ENST00000401314 82 ntBASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 AP001330.3-201ENST00000520123 633 ntBASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV8A0A0C4DH27 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 AC091305.1-201ENST00000479476 895 ntBASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.62■□□□□ 0.89
TRGV8A0A0C4DH27 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
TRGV8A0A0C4DH27 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.61■□□□□ 0.89
TRGV8A0A0C4DH27 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.61■□□□□ 0.89
TRGV8A0A0C4DH27 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV8A0A0C4DH27 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.61■□□□□ 0.89
TRGV8A0A0C4DH27 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.61■□□□□ 0.89
TRGV8A0A0C4DH27 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV8A0A0C4DH27 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRGV8A0A0C4DH27 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 MIR4767-201ENST00000582827 78 ntBASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRGV8A0A0C4DH27 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV8A0A0C4DH27 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV8A0A0C4DH27 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TRGV8A0A0C4DH27 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV8A0A0C4DH27 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.59■□□□□ 0.89
TRGV8A0A0C4DH27 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.59■□□□□ 0.89
TRGV8A0A0C4DH27 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV8A0A0C4DH27 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV8A0A0C4DH27 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV8A0A0C4DH27 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV8A0A0C4DH27 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV8A0A0C4DH27 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.58■□□□□ 0.89
TRGV8A0A0C4DH27 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV8A0A0C4DH27 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV8A0A0C4DH27 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV8A0A0C4DH27 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV8A0A0C4DH27 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRGV8A0A0C4DH27 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV8A0A0C4DH27 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms