Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV38-1A0A0B4J264 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV38-1A0A0B4J264 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV38-1A0A0B4J264 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV38-1A0A0B4J264 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV38-1A0A0B4J264 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV38-1A0A0B4J264 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV38-1A0A0B4J264 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV38-1A0A0B4J264 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV38-1A0A0B4J264 AF131216.4-201ENST00000638924 1588 ntBASIC19.41■□□□□ 0.7
TRAV38-1A0A0B4J264 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV38-1A0A0B4J264 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV38-1A0A0B4J264 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV38-1A0A0B4J264 AC239859.2-201ENST00000444165 318 ntBASIC19.41■□□□□ 0.7
TRAV38-1A0A0B4J264 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV38-1A0A0B4J264 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 AC021242.3-201ENST00000607598 1377 ntBASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV38-1A0A0B4J264 HLA-L-211ENST00000482052 1765 ntBASIC19.39■□□□□ 0.7
TRAV38-1A0A0B4J264 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.39■□□□□ 0.7
TRAV38-1A0A0B4J264 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TRAV38-1A0A0B4J264 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TRAV38-1A0A0B4J264 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV38-1A0A0B4J264 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV38-1A0A0B4J264 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV38-1A0A0B4J264 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV38-1A0A0B4J264 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV38-1A0A0B4J264 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV38-1A0A0B4J264 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV38-1A0A0B4J264 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV38-1A0A0B4J264 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.38■□□□□ 0.69
TRAV38-1A0A0B4J264 MIR4787-201ENST00000607364 84 ntBASIC19.38■□□□□ 0.69
TRAV38-1A0A0B4J264 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV38-1A0A0B4J264 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 AL022069.1-201ENST00000568025 1636 ntBASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV38-1A0A0B4J264 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV38-1A0A0B4J264 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV38-1A0A0B4J264 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV38-1A0A0B4J264 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV38-1A0A0B4J264 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV38-1A0A0B4J264 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV38-1A0A0B4J264 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV38-1A0A0B4J264 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV38-1A0A0B4J264 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV38-1A0A0B4J264 AL161729.1-201ENST00000604104 1402 ntBASIC19.34■□□□□ 0.69
TRAV38-1A0A0B4J264 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV38-1A0A0B4J264 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV38-1A0A0B4J264 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV38-1A0A0B4J264 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRAV38-1A0A0B4J264 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV38-1A0A0B4J264 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms