Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV27A0A087WT01 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRAV27A0A087WT01 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAV27A0A087WT01 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV27A0A087WT01 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV27A0A087WT01 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAV27A0A087WT01 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRAV27A0A087WT01 AC133561.1-201ENST00000568600 2415 ntBASIC20.91■□□□□ 0.94
TRAV27A0A087WT01 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.91■□□□□ 0.94
TRAV27A0A087WT01 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.91■□□□□ 0.94
TRAV27A0A087WT01 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV27A0A087WT01 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV27A0A087WT01 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV27A0A087WT01 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAV27A0A087WT01 AC129492.7-201ENST00000622992 756 ntBASIC20.9■□□□□ 0.94
TRAV27A0A087WT01 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV27A0A087WT01 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV27A0A087WT01 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TRAV27A0A087WT01 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV27A0A087WT01 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.94
TRAV27A0A087WT01 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV27A0A087WT01 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TRAV27A0A087WT01 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV27A0A087WT01 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TRAV27A0A087WT01 AL592295.1-201ENST00000400984 884 ntBASIC20.89■□□□□ 0.93
TRAV27A0A087WT01 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV27A0A087WT01 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV27A0A087WT01 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV27A0A087WT01 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAV27A0A087WT01 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV27A0A087WT01 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV27A0A087WT01 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 KRT18P60-201ENST00000312876 1297 ntBASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV27A0A087WT01 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
TRAV27A0A087WT01 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TRAV27A0A087WT01 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAV27A0A087WT01 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV27A0A087WT01 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV27A0A087WT01 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAV27A0A087WT01 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV27A0A087WT01 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.86■□□□□ 0.93
TRAV27A0A087WT01 DUSP8P5-201ENST00000422884 1815 ntBASIC20.86■□□□□ 0.93
TRAV27A0A087WT01 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV27A0A087WT01 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV27A0A087WT01 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV27A0A087WT01 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV27A0A087WT01 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV27A0A087WT01 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV27A0A087WT01 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV27A0A087WT01 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAV27A0A087WT01 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV27A0A087WT01 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAV27A0A087WT01 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV27A0A087WT01 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV27A0A087WT01 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAV27A0A087WT01 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRAV27A0A087WT01 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV27A0A087WT01 LONRF2P2-201ENST00000439212 571 ntBASIC20.84■□□□□ 0.93
TRAV27A0A087WT01 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.84■□□□□ 0.93
TRAV27A0A087WT01 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAV27A0A087WT01 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV27A0A087WT01 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV27A0A087WT01 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV27A0A087WT01 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV27A0A087WT01 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV27A0A087WT01 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TRAV27A0A087WT01 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV27A0A087WT01 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAV27A0A087WT01 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAV27A0A087WT01 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV27A0A087WT01 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV27A0A087WT01 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV27A0A087WT01 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV27A0A087WT01 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV27A0A087WT01 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV27A0A087WT01 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV27A0A087WT01 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV27A0A087WT01 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV27A0A087WT01 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAV27A0A087WT01 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV27A0A087WT01 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV27A0A087WT01 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV27A0A087WT01 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRAV27A0A087WT01 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.81■□□□□ 0.92
TRAV27A0A087WT01 AC068473.5-201ENST00000616428 2072 ntBASIC20.81■□□□□ 0.92
TRAV27A0A087WT01 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV27A0A087WT01 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms