Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RPH3AQ9Y2J0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 AC090616.6-203ENST00000579186 1945 ntBASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 AL133267.1-201ENST00000398220 340 ntBASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 AP006294.1-201ENST00000415407 339 ntBASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 GIMAP3P-201ENST00000495150 836 ntBASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 AC015910.1-201ENST00000579400 975 ntBASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.14□□□□□ -0.15
RPH3AQ9Y2J0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 MIR1909-201ENST00000411312 80 ntBASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 RN7SL752P-201ENST00000463779 287 ntBASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.13□□□□□ -0.15
RPH3AQ9Y2J0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms