Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 AL138709.1-201ENST00000614840 1693 ntBASIC15.64■□□□□ 0.09
EBF1Q9UH73 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 ELK2AP-201ENST00000392510 1007 ntBASIC15.64■□□□□ 0.09
EBF1Q9UH73 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 RHOQP1-201ENST00000555758 579 ntBASIC15.64■□□□□ 0.09
EBF1Q9UH73 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.64■□□□□ 0.09
EBF1Q9UH73 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 AC145423.3-201ENST00000615987 467 ntBASIC15.64■□□□□ 0.09
EBF1Q9UH73 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF1Q9UH73 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.64■□□□□ 0.09
EBF1Q9UH73 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 AC138035.3-201ENST00000622706 2791 ntBASIC15.63■□□□□ 0.09
EBF1Q9UH73 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 MIR648-201ENST00000385046 94 ntBASIC15.63■□□□□ 0.09
EBF1Q9UH73 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 SLC25A24P2-201ENST00000415059 510 ntBASIC15.63■□□□□ 0.09
EBF1Q9UH73 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 AC004898.1-201ENST00000451057 766 ntBASIC15.63■□□□□ 0.09
EBF1Q9UH73 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 RNA5SP486-201ENST00000515961 83 ntBASIC15.63■□□□□ 0.09
EBF1Q9UH73 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.63■□□□□ 0.09
EBF1Q9UH73 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EBF1Q9UH73 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
EBF1Q9UH73 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
EBF1Q9UH73 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
EBF1Q9UH73 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
EBF1Q9UH73 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms