Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.61□□□□□ -0.23
DUX4Q9UBX2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.61□□□□□ -0.23
DUX4Q9UBX2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
DUX4Q9UBX2 AL122018.1-201ENST00000446607 2310 ntBASIC13.61□□□□□ -0.23
DUX4Q9UBX2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.61□□□□□ -0.23
DUX4Q9UBX2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.61□□□□□ -0.23
DUX4Q9UBX2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 REXO1L2P-201ENST00000425429 2069 ntBASIC13.6□□□□□ -0.23
DUX4Q9UBX2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 REXO1L1P-201ENST00000379010 6598 ntBASIC13.6□□□□□ -0.23
DUX4Q9UBX2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 AP3S2-216ENST00000617003 1561 ntBASIC13.6□□□□□ -0.23
DUX4Q9UBX2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 AC084121.4-201ENST00000641598 221 ntBASIC13.6□□□□□ -0.23
DUX4Q9UBX2 AC079781.4-201ENST00000641908 219 ntBASIC13.6□□□□□ -0.23
DUX4Q9UBX2 AF228730.8-201ENST00000642140 221 ntBASIC13.6□□□□□ -0.23
DUX4Q9UBX2 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DUX4Q9UBX2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 AL592424.1-201ENST00000563624 1536 ntBASIC13.59□□□□□ -0.23
DUX4Q9UBX2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 MROH4P-201ENST00000431302 1578 ntBASIC13.59□□□□□ -0.23
DUX4Q9UBX2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 AC013726.1-201ENST00000563747 2285 ntBASIC13.59□□□□□ -0.23
DUX4Q9UBX2 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 TSEN15P1-201ENST00000423257 515 ntBASIC13.59□□□□□ -0.23
DUX4Q9UBX2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 METTL21AP1-201ENST00000438852 635 ntBASIC13.59□□□□□ -0.23
DUX4Q9UBX2 SPDYE14P-201ENST00000442619 822 ntBASIC13.59□□□□□ -0.23
DUX4Q9UBX2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
DUX4Q9UBX2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms