Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 ACKR1-201ENST00000368121 1240 ntBASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 AC022137.2-201ENST00000503482 481 ntBASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 GNRHR2-203ENST00000581100 1187 ntBASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 AC093813.1-201ENST00000605066 256 ntBASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 MIR6787-201ENST00000616675 61 ntBASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 CICP24-201ENST00000605464 2705 ntBASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC6Q9UBN7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 AC108725.1-201ENST00000495472 409 ntBASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 AP001582.1-201ENST00000525856 295 ntBASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 KRT90P-201ENST00000549264 1064 ntBASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 AC015910.1-201ENST00000579400 975 ntBASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 AL606495.2-201ENST00000605867 535 ntBASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 SNX18-202ENST00000343017 3140 ntBASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC6Q9UBN7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HDAC6Q9UBN7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.33■□□□□ 0.37
HDAC6Q9UBN7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC6Q9UBN7 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.33■□□□□ 0.37
HDAC6Q9UBN7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC6Q9UBN7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HDAC6Q9UBN7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC6Q9UBN7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC6Q9UBN7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HDAC6Q9UBN7 KRT8P44-201ENST00000441609 1350 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms