Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 DGCR5-201ENST00000399539 862 ntBASIC13.15□□□□□ -0.3
GCM1Q9NP62 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 ELK1P1-201ENST00000485699 580 ntBASIC13.15□□□□□ -0.3
GCM1Q9NP62 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 CTBP2P3-201ENST00000585629 1255 ntBASIC13.15□□□□□ -0.3
GCM1Q9NP62 BRI3BPP1-201ENST00000594224 787 ntBASIC13.15□□□□□ -0.3
GCM1Q9NP62 AL049840.4-201ENST00000602422 811 ntBASIC13.15□□□□□ -0.3
GCM1Q9NP62 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
GCM1Q9NP62 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
GCM1Q9NP62 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
GCM1Q9NP62 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 AL442647.2-201ENST00000429864 857 ntBASIC13.14□□□□□ -0.31
GCM1Q9NP62 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 WASH4P-201ENST00000564273 1246 ntBASIC13.14□□□□□ -0.31
GCM1Q9NP62 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 AL358472.5-202ENST00000641448 1267 ntBASIC13.14□□□□□ -0.31
GCM1Q9NP62 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GCM1Q9NP62 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.14□□□□□ -0.31
GCM1Q9NP62 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GCM1Q9NP62 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.13□□□□□ -0.31
GCM1Q9NP62 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms