Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AL928921.2-201ENST00000641325 2442 ntBASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AL359881.3-201ENST00000602640 1721 ntBASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AC004987.2-201ENST00000395959 1148 ntBASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 RHOQP3-201ENST00000437982 621 ntBASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AC098859.1-201ENST00000502915 1238 ntBASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 GOLGA2P9-201ENST00000596977 1937 ntBASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SND1-IT1Q9HBX3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms