Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 AC092580.3-201ENST00000430932 139 ntBASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 LILRP1-201ENST00000444199 1370 ntBASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 AC125807.1-201ENST00000483097 614 ntBASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 AC007787.1-201ENST00000588095 1583 ntBASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PACSIN1Q9BY11 AC005840.4-201ENST00000541242 2494 ntBASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 SDHAP3-202ENST00000515467 728 ntBASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AC027369.6-201ENST00000525520 931 ntBASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AC000095.1-201ENST00000603208 874 ntBASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AC027601.5-201ENST00000624065 2482 ntBASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PACSIN1Q9BY11 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PACSIN1Q9BY11 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms