Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SSBP3Q9BWW4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 AL355864.2-201ENST00000447420 863 ntBASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 AP001582.1-201ENST00000525856 295 ntBASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 AC068587.3-201ENST00000526613 355 ntBASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 HILS1-202ENST00000545329 423 ntBASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 BTNL10-201ENST00000595971 695 ntBASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP3Q9BWW4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SSBP3Q9BWW4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SSBP3Q9BWW4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SSBP3Q9BWW4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SSBP3Q9BWW4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SSBP3Q9BWW4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms