Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 GPR182-203ENST00000622922 591 ntBASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 AGAP7P-201ENST00000582299 2062 ntBASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 AGAP14-201ENST00000624701 2060 ntBASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 MROH4P-201ENST00000431302 1578 ntBASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 AC068418.2-201ENST00000577309 3703 ntBASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 AC106881.1-201ENST00000605849 3329 ntBASIC18.53■□□□□ 0.56
RPAP1Q9BWH6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.52■□□□□ 0.56
RPAP1Q9BWH6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 MIR1247-201ENST00000408206 136 ntBASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 RN7SL560P-201ENST00000577943 264 ntBASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RPAP1Q9BWH6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPAP1Q9BWH6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms